RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 SEC14L1Q92503 715 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 TRMT2BQ96GJ1 504 aaKnown RBP5.54□□□□□ -1.52
CDH1-211ENST00000567320 C11orf84Q9BUA3 381 aaPredicted RBP5.54□□□□□ -1.52
CDH1-211ENST00000567320 PCDH18Q9HCL0 1135 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 CYP26B1Q9NR63 512 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 STRIP2Q9ULQ0 834 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 TIMM13Q9Y5L4 95 aaPredicted RBP5.54□□□□□ -1.52
CDH1-211ENST00000567320 MRVI1Q9Y6F6 885 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 ZNF536O15090 1300 aa5.53□□□□□ -1.52
CDH1-211ENST00000567320 SGSM2O43147 1006 aa5.53□□□□□ -1.52
CDH1-211ENST00000567320 SNRPB2P08579 225 aaKnown RBP5.53□□□□□ -1.52
CDH1-211ENST00000567320 KIAA2012Q0VF49 1180 aa5.53□□□□□ -1.52
CDH1-211ENST00000567320 MCTP2Q6DN12 878 aa5.53□□□□□ -1.52
CDH1-211ENST00000567320 ZNF513Q8N8E2 541 aaPredicted RBP5.53□□□□□ -1.52
CDH1-211ENST00000567320 BTN2A2Q8WVV5 523 aa5.53□□□□□ -1.52
CDH1-211ENST00000567320 DIO2Q92813 273 aa5.53□□□□□ -1.52
CDH1-211ENST00000567320 LOXL4Q96JB6 756 aa5.53□□□□□ -1.52
CDH1-211ENST00000567320 NKX2-4Q9H2Z4 354 aa5.53□□□□□ -1.52
CDH1-211ENST00000567320 SMPD4Q9NXE4 827 aa5.53□□□□□ -1.52
CDH1-211ENST00000567320 COA3Q9Y2R0 106 aaPredicted RBP5.53□□□□□ -1.52
CDH1-211ENST00000567320 SSBP05455 408 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDH1-211ENST00000567320 THBS2P35442 1172 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 BCL6P41182 706 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 STAT5AP42229 794 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 MROH9Q5TGP6 573 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 PRAMEF18Q5VWM3 479 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 BORAQ6PGQ7 559 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 C6orf15Q6UXA7 325 aaPredicted RBP5.52□□□□□ -1.53
CDH1-211ENST00000567320 VPS37DQ86XT2 251 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 TTLL6Q8N841 843 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 LINC00482Q8N8I6 264 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 KYQ8NBH2 561 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 FRS2Q8WU20 508 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 TMEM169Q96HH4 297 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 TGIF2Q9GZN2 237 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 CAPN10Q9HC96 672 aa5.52□□□□□ -1.53
CDH1-211ENST00000567320 CNOT11Q9UKZ1 510 aaKnown RBP5.52□□□□□ -1.53
CDH1-211ENST00000567320 DDX3XO00571 662 aaKnown RBP eCLIP5.51□□□□□ -1.53
CDH1-211ENST00000567320 SMAD7O15105 426 aaKnown RBP5.51□□□□□ -1.53
CDH1-211ENST00000567320 MEFVO15553 781 aaPredicted RBP5.51□□□□□ -1.53
CDH1-211ENST00000567320 DDAH1O94760 285 aa5.51□□□□□ -1.53
CDH1-211ENST00000567320 RPL13P26373 211 aaKnown RBP5.51□□□□□ -1.53
CDH1-211ENST00000567320 MAGEA10P43363 369 aaPredicted RBP5.51□□□□□ -1.53
CDH1-211ENST00000567320 NKX3-2P78367 333 aa5.51□□□□□ -1.53
CDH1-211ENST00000567320 TMPRSS5Q9H3S3 457 aa5.51□□□□□ -1.53
CDH1-211ENST00000567320 ACTR10Q9NZ32 417 aa5.51□□□□□ -1.53
CDH1-211ENST00000567320 MROH6A6NGR9 719 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 TBX1O43435 398 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 CYP1A1P04798 512 aaPredicted RBP5.5□□□□□ -1.53
CDH1-211ENST00000567320 ITGB3P05106 788 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 ITGAVP06756 1048 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 HOXC12P31275 282 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 GTF2A2P52657 109 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 E4F1Q66K89 784 aaPredicted RBP5.5□□□□□ -1.53
CDH1-211ENST00000567320 MIB1Q86YT6 1006 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 FAM178BQ8IXR5 827 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 LGI4Q8N135 537 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 CHST13Q8NET6 341 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 NPLOC4Q8TAT6 608 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 MRGPRX3Q96LB0 322 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 NGRNQ9NPE2 291 aaKnown RBP5.5□□□□□ -1.53
CDH1-211ENST00000567320 INVSQ9Y283 1065 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 PCDHA2Q9Y5H9 948 aa5.5□□□□□ -1.53
CDH1-211ENST00000567320 B2RBV5 119 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 SLC6A11P48066 632 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 ITGA1P56199 1179 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 KCNAB2Q13303 367 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 CHRNA2Q15822 529 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 PRSS53Q2L4Q9 553 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 TNNI3KQ59H18 835 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 FAM26FQ5R3K3 315 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 FAM126BQ8IXS8 530 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 PPIL6Q8IXY8 311 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 TXNDC5Q8NBS9 432 aaKnown RBP5.49□□□□□ -1.53
CDH1-211ENST00000567320 ZSWIM3Q96MP5 696 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 TMEFF2Q9UIK5 374 aaPredicted RBP5.49□□□□□ -1.53
CDH1-211ENST00000567320 MYRFQ9Y2G1 1151 aa5.49□□□□□ -1.53
CDH1-211ENST00000567320 CPP00450 1065 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 PLATP00750 562 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 ATF4P18848 351 aaPredicted RBP5.48□□□□□ -1.53
CDH1-211ENST00000567320 TBC1D10BQ4KMP7 808 aaPredicted RBP5.48□□□□□ -1.53
CDH1-211ENST00000567320 GLB1LQ6UWU2 654 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 ZNF227Q86WZ6 799 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 RIOX2Q8IUF8 465 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 CCDC103Q8IW40 242 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 LCORQ96JN0 433 aaPredicted RBP5.48□□□□□ -1.53
CDH1-211ENST00000567320 CCDC140Q96MF4 163 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 C8orf49Q96NF6 230 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 L2HGDHQ9H9P8 463 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 CLDND1Q9NY35 253 aa5.48□□□□□ -1.53
CDH1-211ENST00000567320 HGSO14964 777 aaPredicted RBP5.47□□□□□ -1.53
CDH1-211ENST00000567320 SUSD5O60279 629 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 LTBRP36941 435 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 ADAM17P78536 824 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 LSAMPQ13449 338 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 SF1Q15637 639 aaKnown RBP5.47□□□□□ -1.53
CDH1-211ENST00000567320 STEAP3Q658P3 488 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 RCBTB1Q8NDN9 531 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 TOE1Q96GM8 510 aaKnown RBP5.47□□□□□ -1.53
CDH1-211ENST00000567320 CLIC6Q96NY7 704 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms