RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 USP38Q8NB14 1042 aa17.43■□□□□ 0.38
RNF40-209ENST00000566703 ATXN2LQ8WWM7 1075 aaKnown RBP17.43■□□□□ 0.38
RNF40-209ENST00000566703 SLC9A7Q96T83 725 aa17.43■□□□□ 0.38
RNF40-209ENST00000566703 RIOX1Q9H6W3 641 aa17.43■□□□□ 0.38
RNF40-209ENST00000566703 PCDHA1Q9Y5I3 950 aa17.43■□□□□ 0.38
RNF40-209ENST00000566703 LAMA4Q16363 1823 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 ERICH2A1L162 156 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 CYP21A2P08686 494 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 TGFB3P10600 412 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 CHMLP26374 656 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 RABGGTBP53611 331 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 TMEM67Q5HYA8 995 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 VSIG10LQ86VR7 867 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 KAT2BQ92831 832 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 PDCD2LQ9BRP1 358 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 KATNAL1Q9BW62 490 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 SUPT16HQ9Y5B9 1047 aaKnown RBP17.42■□□□□ 0.38
RNF40-209ENST00000566703 MRVI1Q9Y6F6 885 aa17.42■□□□□ 0.38
RNF40-209ENST00000566703 IFIT3O14879 490 aaKnown RBP17.41■□□□□ 0.38
RNF40-209ENST00000566703 PPP1R11O60927 126 aaPredicted RBP17.41■□□□□ 0.38
RNF40-209ENST00000566703 PPFIA4O75335 1185 aa17.41■□□□□ 0.38
RNF40-209ENST00000566703 BAIAP3O94812 1187 aa17.41■□□□□ 0.38
RNF40-209ENST00000566703 RBL2Q08999 1139 aa17.41■□□□□ 0.38
RNF40-209ENST00000566703 GRM4Q14833 912 aa17.41■□□□□ 0.38
RNF40-209ENST00000566703 PPP2R2DQ66LE6 453 aa17.41■□□□□ 0.38
RNF40-209ENST00000566703 DHX37Q8IY37 1157 aaKnown RBP17.41■□□□□ 0.38
RNF40-209ENST00000566703 PPTC7Q8NI37 304 aa17.41■□□□□ 0.38
RNF40-209ENST00000566703 FTOQ9C0B1 505 aaKnown RBP eCLIP17.41■□□□□ 0.38
RNF40-209ENST00000566703 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
RNF40-209ENST00000566703 GCOM1H8Y6P7 765 aaPredicted RBP17.4■□□□□ 0.38
RNF40-209ENST00000566703 HAS3O00219 553 aa17.4■□□□□ 0.38
RNF40-209ENST00000566703 POLR2MP0CAP2 368 aa17.4■□□□□ 0.38
RNF40-209ENST00000566703 HOXD8P13378 290 aaPredicted RBP17.4■□□□□ 0.38
RNF40-209ENST00000566703 IGFBP4P22692 258 aa17.4■□□□□ 0.38
RNF40-209ENST00000566703 PTH1RQ03431 593 aa17.4■□□□□ 0.38
RNF40-209ENST00000566703 SART3Q15020 963 aaKnown RBP17.4■□□□□ 0.38
RNF40-209ENST00000566703 GDF6Q6KF10 455 aaPredicted RBP17.4■□□□□ 0.38
RNF40-209ENST00000566703 CHST3Q7LGC8 479 aa17.4■□□□□ 0.38
RNF40-209ENST00000566703 RALYLQ86SE5 291 aaKnown RBP17.4■□□□□ 0.38
RNF40-209ENST00000566703 NCOA7Q8NI08 942 aa17.4■□□□□ 0.38
RNF40-209ENST00000566703 CTAGE1Q96RT6 745 aa17.4■□□□□ 0.38
RNF40-209ENST00000566703 GTF2IRD1Q9UHL9 959 aa17.4■□□□□ 0.38
RNF40-209ENST00000566703 PNMA6FA0A0J9YX94 578 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 F2P00734 622 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 MYOGP15173 224 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 SELPP16109 830 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 POU3F3P20264 500 aaPredicted RBP17.39■□□□□ 0.37
RNF40-209ENST00000566703 PSEN2P49810 448 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 CHMP4BP1P59074 171 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 TROAPQ12815 778 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 WTAPQ15007 396 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 CELF3Q5SZQ8 465 aaKnown RBP17.39■□□□□ 0.37
RNF40-209ENST00000566703 C7orf31Q8N865 590 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 PPP1R13LQ8WUF5 828 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 PPM1EQ8WY54 764 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 MAP3K14Q99558 947 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 HDAC6Q9UBN7 1215 aa17.39■□□□□ 0.37
RNF40-209ENST00000566703 E7EWF7 191 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 SGSM2O43147 1006 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 RGS20O76081 388 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 MYCLP12524 364 aaPredicted RBP17.38■□□□□ 0.37
RNF40-209ENST00000566703 PTK7Q13308 1070 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 PGM5Q15124 567 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 MYSM1Q5VVJ2 828 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 LRRC8DQ7L1W4 858 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 HERC6Q8IVU3 1022 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 MAP4K1Q92918 833 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 PIGSQ96S52 555 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 MTA3Q9BTC8 594 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 TSPYL2Q9H2G4 693 aaPredicted RBP17.38■□□□□ 0.37
RNF40-209ENST00000566703 THEGQ9P2T0 379 aa17.38■□□□□ 0.37
RNF40-209ENST00000566703 LAMA2P24043 3122 aaKnown RBP17.38■□□□□ 0.37
RNF40-209ENST00000566703 CYTH3O43739 400 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 STAM2O75886 525 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 CXCL10P02778 98 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 SMARCA1P28370 1054 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 CCND2P30279 289 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 MRPS5P82675 430 aaKnown RBP17.37■□□□□ 0.37
RNF40-209ENST00000566703 MFSD10Q14728 455 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 GPNMBQ14956 572 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 KIAA0753Q2KHM9 967 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 SLC35G1Q2M3R5 365 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 CATIPQ7Z7H3 387 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 HOMER1Q86YM7 354 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 DHX38Q92620 1227 aaKnown RBP17.37■□□□□ 0.37
RNF40-209ENST00000566703 ASB2Q96Q27 587 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 PRDM6Q9NQX0 595 aa17.37■□□□□ 0.37
RNF40-209ENST00000566703 CA3P07451 260 aa17.36■□□□□ 0.37
RNF40-209ENST00000566703 CKBP12277 381 aa17.36■□□□□ 0.37
RNF40-209ENST00000566703 HOXA13P31271 388 aaPredicted RBP17.36■□□□□ 0.37
RNF40-209ENST00000566703 CNKSR3Q6P9H4 555 aa17.36■□□□□ 0.37
RNF40-209ENST00000566703 SPATA33Q96N06 139 aa17.36■□□□□ 0.37
RNF40-209ENST00000566703 ALG1Q9BT22 464 aa17.36■□□□□ 0.37
RNF40-209ENST00000566703 ABHD14A-ACY1A0A1B0GW23 586 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 EFCAB14O75071 495 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 GGPS1O95749 300 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 ICAM3P32942 547 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 KCNJ6P48051 423 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms