RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TIFAQ96CG3 184 aa21.27■■□□□ 1
USB1-213ENST00000566292 PDCD2LQ9BRP1 358 aa21.27■■□□□ 1
USB1-213ENST00000566292 DDX41Q9UJV9 622 aaKnown RBP21.27■■□□□ 1
USB1-213ENST00000566292 CUL9Q8IWT3 2517 aa21.26■□□□□ 0.99
USB1-213ENST00000566292 CHD9Q3L8U1 2897 aa21.26■□□□□ 0.99
USB1-213ENST00000566292 DLL1O00548 723 aa21.26■□□□□ 0.99
USB1-213ENST00000566292 LSG1Q9H089 658 aaKnown RBP21.26■□□□□ 0.99
USB1-213ENST00000566292 ZNF576Q9H609 170 aa21.26■□□□□ 0.99
USB1-213ENST00000566292 MAP3K20Q9NYL2 800 aaKnown RBP21.26■□□□□ 0.99
USB1-213ENST00000566292 TET1Q8NFU7 2136 aa21.25■□□□□ 0.99
USB1-213ENST00000566292 RGS20O76081 388 aa21.25■□□□□ 0.99
USB1-213ENST00000566292 PTPN11Q06124 597 aaPredicted RBP21.25■□□□□ 0.99
USB1-213ENST00000566292 COL9A3Q14050 684 aaPredicted RBP21.25■□□□□ 0.99
USB1-213ENST00000566292 CATIPQ7Z7H3 387 aa21.25■□□□□ 0.99
USB1-213ENST00000566292 SAMD3Q8N6K7 520 aa21.25■□□□□ 0.99
USB1-213ENST00000566292 MAFAQ8NHW3 353 aaPredicted RBP21.25■□□□□ 0.99
USB1-213ENST00000566292 IL31RAQ8NI17 732 aa21.25■□□□□ 0.99
USB1-213ENST00000566292 KAT2BQ92831 832 aa21.25■□□□□ 0.99
USB1-213ENST00000566292 LY9Q9HBG7 655 aa21.25■□□□□ 0.99
USB1-213ENST00000566292 PNMA6FA0A0J9YX94 578 aa21.24■□□□□ 0.99
USB1-213ENST00000566292 MYCLP12524 364 aaPredicted RBP21.24■□□□□ 0.99
USB1-213ENST00000566292 FOSL2P15408 326 aa21.24■□□□□ 0.99
USB1-213ENST00000566292 CHMP4BP1P59074 171 aa21.24■□□□□ 0.99
USB1-213ENST00000566292 PGM5Q15124 567 aa21.24■□□□□ 0.99
USB1-213ENST00000566292 SKAP1Q86WV1 359 aa21.24■□□□□ 0.99
USB1-213ENST00000566292 RPUSD2Q8IZ73 545 aaKnown RBP21.24■□□□□ 0.99
USB1-213ENST00000566292 EMID1Q96A84 441 aaPredicted RBP21.24■□□□□ 0.99
USB1-213ENST00000566292 ESYT1Q9BSJ8 1104 aa21.24■□□□□ 0.99
USB1-213ENST00000566292 MYL10Q9BUA6 226 aa21.24■□□□□ 0.99
USB1-213ENST00000566292 MTIF3Q9H2K0 278 aaKnown RBP21.24■□□□□ 0.99
USB1-213ENST00000566292 MRVI1Q9Y6F6 885 aa21.24■□□□□ 0.99
USB1-213ENST00000566292 VSIG10LQ86VR7 867 aa21.23■□□□□ 0.99
USB1-213ENST00000566292 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.23■□□□□ 0.99
USB1-213ENST00000566292 ZNF654Q8IZM8 581 aa21.23■□□□□ 0.99
USB1-213ENST00000566292 DOCK5Q9H7D0 1870 aa21.23■□□□□ 0.99
USB1-213ENST00000566292 PRUNE2Q8WUY3 3088 aa21.23■□□□□ 0.99
USB1-213ENST00000566292 GCOM1H8Y6P7 765 aaPredicted RBP21.22■□□□□ 0.99
USB1-213ENST00000566292 POLR2MP0CAP2 368 aa21.22■□□□□ 0.99
USB1-213ENST00000566292 CASTP20810 708 aaKnown RBP21.22■□□□□ 0.99
USB1-213ENST00000566292 TRAF1Q13077 416 aa21.22■□□□□ 0.99
USB1-213ENST00000566292 DEFB128Q7Z7B8 93 aa21.22■□□□□ 0.99
USB1-213ENST00000566292 PIBF1Q8WXW3 757 aa21.22■□□□□ 0.99
USB1-213ENST00000566292 ZFP91Q96JP5 570 aaPredicted RBP21.22■□□□□ 0.99
USB1-213ENST00000566292 CTAGE1Q96RT6 745 aa21.22■□□□□ 0.99
USB1-213ENST00000566292 MAP3K14Q99558 947 aa21.22■□□□□ 0.99
USB1-213ENST00000566292 PITPNM1O00562 1244 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 SLC27A2O14975 620 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 PRC1O43663 620 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 DDAH1O94760 285 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 LAMC2Q13753 1193 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 DGKDQ16760 1214 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 GDF6Q6KF10 455 aaPredicted RBP21.21■□□□□ 0.99
USB1-213ENST00000566292 CASC1Q6TDU7 716 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 SESTD1Q86VW0 696 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 FCHSD1Q86WN1 690 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 DHX37Q8IY37 1157 aaKnown RBP21.21■□□□□ 0.99
USB1-213ENST00000566292 PPTC7Q8NI37 304 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 MTA3Q9BTC8 594 aa21.21■□□□□ 0.99
USB1-213ENST00000566292 PTPRSQ13332 1948 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 SH2B2O14492 632 aaPredicted RBP21.2■□□□□ 0.98
USB1-213ENST00000566292 PFKMP08237 780 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 IQCF3P0C7M6 154 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 CCND2P30279 289 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 SP2Q02086 613 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 NECTIN1Q15223 517 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 RAB30Q15771 203 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 PTGISQ16647 500 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 CREB3L3Q68CJ9 461 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 GPKOWQ92917 476 aaPredicted RBP eCLIP21.2■□□□□ 0.98
USB1-213ENST00000566292 SPZ1Q9BXG8 430 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 MSRAQ9UJ68 235 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 NOD1Q9Y239 953 aa21.2■□□□□ 0.98
USB1-213ENST00000566292 YBX2Q9Y2T7 364 aaKnown RBP21.2■□□□□ 0.98
USB1-213ENST00000566292 ZBBXA8MT70 800 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 SORBS3O60504 671 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 ZNF286BP0CG31 522 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 HOXD8P13378 290 aaPredicted RBP21.19■□□□□ 0.98
USB1-213ENST00000566292 MCM5P33992 734 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 RFC2P35250 354 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 PSEN2P49810 448 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 RABGGTBP53611 331 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 CELF3Q5SZQ8 465 aaKnown RBP21.19■□□□□ 0.98
USB1-213ENST00000566292 MYSM1Q5VVJ2 828 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 CTCFLQ8NI51 663 aaPredicted RBP21.19■□□□□ 0.98
USB1-213ENST00000566292 NKX2-4Q9H2Z4 354 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 SLC4A7Q9Y6M7 1214 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 FRMPD4Q14CM0 1322 aa21.19■□□□□ 0.98
USB1-213ENST00000566292 HAS3O00219 553 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 PLEKHA8P1O95397 391 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 GGPS1O95749 300 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 F2P00734 622 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 UBA1P22314 1058 aaKnown RBP21.18■□□□□ 0.98
USB1-213ENST00000566292 KIF5BP33176 963 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 BFSP2Q13515 415 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 HSDL1Q3SXM5 330 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 KCNV1Q6PIU1 500 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 RETREG2Q8NC44 543 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 DHX38Q92620 1227 aaKnown RBP21.18■□□□□ 0.98
USB1-213ENST00000566292 TMEM87BQ96K49 555 aa21.18■□□□□ 0.98
USB1-213ENST00000566292 ALG1Q9BT22 464 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms