RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 LY6KQ17RY6 165 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 CASC1Q6TDU7 716 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 MB21D2Q8IYB1 491 aaPredicted RBP17.39■□□□□ 0.37
SPG7-210ENST00000564409 CCDC155Q8N6L0 562 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 RETREG2Q8NC44 543 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 MAFAQ8NHW3 353 aaPredicted RBP17.39■□□□□ 0.37
SPG7-210ENST00000564409 IGDCC4Q8TDY8 1250 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 AFG1LQ8WV93 481 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 PDCD2LQ9BRP1 358 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 KATNAL1Q9BW62 490 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
SPG7-210ENST00000564409 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
SPG7-210ENST00000564409 DDAH1O94760 285 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 GNAQP50148 359 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 VSIG10LQ86VR7 867 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 HOMER1Q86YM7 354 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.38■□□□□ 0.37
SPG7-210ENST00000564409 PPTC7Q8NI37 304 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 MYLIPQ8WY64 445 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 PIGSQ96S52 555 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 LZTS2Q9BRK4 669 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 SPZ1Q9BXG8 430 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 PBX4Q9BYU1 374 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 NOD1Q9Y239 953 aa17.38■□□□□ 0.37
SPG7-210ENST00000564409 STAM2O75886 525 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 PARNO95453 639 aaKnown RBP17.37■□□□□ 0.37
SPG7-210ENST00000564409 CYP2C9P11712 490 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 ACTN1P12814 892 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 CCND2P30279 289 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 MCM5P33992 734 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 OTOP2Q7RTS6 562 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 DHX37Q8IY37 1157 aaKnown RBP17.37■□□□□ 0.37
SPG7-210ENST00000564409 CTCFLQ8NI51 663 aaPredicted RBP17.37■□□□□ 0.37
SPG7-210ENST00000564409 CAGE1Q8TC20 777 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 TMEM87BQ96K49 555 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 SLC4A7Q9Y6M7 1214 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 GBF1Q92538 1859 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 TANC1Q9C0D5 1861 aa17.37■□□□□ 0.37
SPG7-210ENST00000564409 CYTH3O43739 400 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 PPFIA4O75335 1185 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 HOXD8P13378 290 aaPredicted RBP17.36■□□□□ 0.37
SPG7-210ENST00000564409 ANTXR2P58335 489 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 GRIN2CQ14957 1233 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 PGM5Q15124 567 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 PTGISQ16647 500 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 SLC35G1Q2M3R5 365 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 SCLYQ96I15 445 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 SENP2Q9HC62 589 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 CXXC1Q9P0U4 656 aaPredicted RBP17.36■□□□□ 0.37
SPG7-210ENST00000564409 TAF6LQ9Y6J9 622 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 SCN5AQ14524 2016 aa17.36■□□□□ 0.37
SPG7-210ENST00000564409 CALM1P0DP23 149 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 CALM2P0DP24 149 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 CALM3P0DP25 149 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 MYCLP12524 364 aaPredicted RBP17.35■□□□□ 0.37
SPG7-210ENST00000564409 HOXA13P31271 388 aaPredicted RBP17.35■□□□□ 0.37
SPG7-210ENST00000564409 LIFRP42702 1097 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 MYSM1Q5VVJ2 828 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 CHST3Q7LGC8 479 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 ZNF654Q8IZM8 581 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 AFAP1L1Q8TED9 768 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 KAT2BQ92831 832 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 RRP36Q96EU6 259 aaKnown RBP17.35■□□□□ 0.37
SPG7-210ENST00000564409 GAS2L1Q99501 681 aaPredicted RBP17.35■□□□□ 0.37
SPG7-210ENST00000564409 ESYT1Q9BSJ8 1104 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 LSG1Q9H089 658 aaKnown RBP17.35■□□□□ 0.37
SPG7-210ENST00000564409 SLC28A3Q9HAS3 691 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 LY9Q9HBG7 655 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 PCDHA11Q9Y5I1 949 aa17.35■□□□□ 0.37
SPG7-210ENST00000564409 GRXCR1A8MXD5 290 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 PRC1O43663 620 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 RGS20O76081 388 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 IQCF3P0C7M6 154 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 PBX2P40425 430 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 RBL2Q08999 1139 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 FRMPD4Q14CM0 1322 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 GNPTABQ3T906 1256 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 BMP2KLQ5H9B9 411 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 CELF3Q5SZQ8 465 aaKnown RBP17.34■□□□□ 0.37
SPG7-210ENST00000564409 XRRA1Q6P2D8 792 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 CENPQQ7L2Z9 268 aaPredicted RBP17.34■□□□□ 0.37
SPG7-210ENST00000564409 C7orf31Q8N865 590 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 PHOSPHO2Q8TCD6 241 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 VWCEQ96DN2 955 aa17.34■□□□□ 0.37
SPG7-210ENST00000564409 SEC63Q9UGP8 760 aaKnown RBP17.34■□□□□ 0.37
SPG7-210ENST00000564409 CCDC69A6NI79 296 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 BAIAP3O94812 1187 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 F2P00734 622 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 ATP2A2P16615 1042 aaKnown RBP17.33■□□□□ 0.36
SPG7-210ENST00000564409 PSEN2P49810 448 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 NECTIN1Q15223 517 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 RNF20Q5VTR2 975 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 NFXL1Q6ZNB6 911 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 FCHSD1Q86WN1 690 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 CUL5Q93034 780 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 GTF2IRD1Q9UHL9 959 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 CUL9Q8IWT3 2517 aa17.33■□□□□ 0.36
SPG7-210ENST00000564409 TET1Q8NFU7 2136 aa17.32■□□□□ 0.36
SPG7-210ENST00000564409 ZBBXA8MT70 800 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms