RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 SLC9A7Q96T83 725 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 NKX2-4Q9H2Z4 354 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 PRDM12Q9H4Q4 367 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 PXMP2Q9NR77 195 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 PCDHA11Q9Y5I1 949 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 PALM3A6NDB9 673 aaPredicted RBP11.07□□□□□ -0.64
CLN6-203ENST00000563917 ARIH2O95376 493 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 CYP21A2P08686 494 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 IQCF3P0C7M6 154 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 GSPT1P15170 499 aaKnown RBP11.07□□□□□ -0.64
CLN6-203ENST00000563917 CHMLP26374 656 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 CCND2P30279 289 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 KIF5BP33176 963 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 HSD17B4P51659 736 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 ARHGAP1Q07960 439 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 GRM4Q14833 912 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 SEC23AQ15436 765 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 CASC1Q6TDU7 716 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 CYB5R4Q7L1T6 521 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
CLN6-203ENST00000563917 AFAP1L1Q8TED9 768 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 COL20A1Q9P218 1284 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 MAD2L2Q9UI95 211 aa11.07□□□□□ -0.64
CLN6-203ENST00000563917 DDX41Q9UJV9 622 aaKnown RBP11.07□□□□□ -0.64
CLN6-203ENST00000563917 COL6A3P12111 3177 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 PNMA6FA0A0J9YX94 578 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 E7EWF7 191 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 GTPBP6O43824 516 aaPredicted RBP11.06□□□□□ -0.64
CLN6-203ENST00000563917 BAIAP3O94812 1187 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 TGFB3P10600 412 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 PDE4AP27815 886 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 HOXA13P31271 388 aaPredicted RBP11.06□□□□□ -0.64
CLN6-203ENST00000563917 PSEN2P49810 448 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 RABGGTBP53611 331 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 GNPTABQ3T906 1256 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 NFXL1Q6ZNB6 911 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 STOX1Q6ZVD7 989 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 SESTD1Q86VW0 696 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 PPTC7Q8NI37 304 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 PHOSPHO2Q8TCD6 241 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 CUL5Q93034 780 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 EMID1Q96A84 441 aaPredicted RBP11.06□□□□□ -0.64
CLN6-203ENST00000563917 SPATA33Q96N06 139 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 PIGSQ96S52 555 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 PDCD2LQ9BRP1 358 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 ALG1Q9BT22 464 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 MLXIPQ9HAP2 919 aa11.06□□□□□ -0.64
CLN6-203ENST00000563917 SEC63Q9UGP8 760 aaKnown RBP11.06□□□□□ -0.64
CLN6-203ENST00000563917 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 NOP56O00567 594 aaKnown RBP11.05□□□□□ -0.64
CLN6-203ENST00000563917 SGSM2O43147 1006 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 PPFIA4O75335 1185 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 SELPP16109 830 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 GNAQP50148 359 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 IRX6P78412 446 aaPredicted RBP11.05□□□□□ -0.64
CLN6-203ENST00000563917 PTH1RQ03431 593 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 PGM5Q15124 567 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 TJAP1Q5JTD0 557 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 VSIG10LQ86VR7 867 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 TMTC2Q8N394 836 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 PPP1R13LQ8WUF5 828 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 MTMR8Q96EF0 704 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 RRP36Q96EU6 259 aaKnown RBP11.05□□□□□ -0.64
CLN6-203ENST00000563917 LZTS2Q9BRK4 669 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 RIOX1Q9H6W3 641 aa11.05□□□□□ -0.64
CLN6-203ENST00000563917 YBX2Q9Y2T7 364 aaKnown RBP11.05□□□□□ -0.64
CLN6-203ENST00000563917 CCDC69A6NI79 296 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 EFCAB14O75071 495 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 STAM2O75886 525 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 GGPS1O95749 300 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 GHRHRQ02643 423 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 MFSD10Q14728 455 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 SKIV2LQ15477 1246 aaKnown RBP11.04□□□□□ -0.64
CLN6-203ENST00000563917 CCDC85BQ15834 202 aaPredicted RBP11.04□□□□□ -0.64
CLN6-203ENST00000563917 KIAA0753Q2KHM9 967 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 CELF3Q5SZQ8 465 aaKnown RBP11.04□□□□□ -0.64
CLN6-203ENST00000563917 GDF6Q6KF10 455 aaPredicted RBP11.04□□□□□ -0.64
CLN6-203ENST00000563917 LRRC8DQ7L1W4 858 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 SMARCC2Q8TAQ2 1214 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 ATXN2LQ8WWM7 1075 aaKnown RBP11.04□□□□□ -0.64
CLN6-203ENST00000563917 PIBF1Q8WXW3 757 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 IL25Q9H293 177 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 THEGQ9P2T0 379 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 HDAC6Q9UBN7 1215 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 GTF2IRD1Q9UHL9 959 aa11.04□□□□□ -0.64
CLN6-203ENST00000563917 KIAA1217Q5T5P2 1943 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 CUL9Q8IWT3 2517 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 TLL1O43897 1013 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 SORBS3O60504 671 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 PPP1R11O60927 126 aaPredicted RBP11.03□□□□□ -0.64
CLN6-203ENST00000563917 DDAH1O94760 285 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 F2P00734 622 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 CA3P07451 260 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 ZNF286BP0CG31 522 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 CALM1P0DP23 149 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 CALM2P0DP24 149 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 CALM3P0DP25 149 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms