RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 CALM3P0DP25 149 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TXNP10599 105 aaKnown RBP10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 EIF2AK2P19525 551 aaKnown RBP10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CHMP4BP1P59074 171 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TTLL4Q14679 1199 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 STXBP2Q15833 593 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 DUSP28Q4G0W2 176 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TAPT1Q6NXT6 567 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SEPT14Q6ZU15 432 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 STOX1Q6ZVD7 989 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 ZNF654Q8IZM8 581 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MORC4Q8TE76 937 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 RRP36Q96EU6 259 aaKnown RBP10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TMEM87BQ96K49 555 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PIGSQ96S52 555 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 POLR3EQ9NVU0 708 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 GNEQ9Y223 722 aaKnown RBP10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 Q9Y3F1 56 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SLC12A7Q9Y666 1083 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LRRC37A2A6NM11 1700 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TRIOBPQ9H2D6 2365 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PNMA6FA0A0J9YX94 578 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TRIM43BA6NCK2 446 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 GCOM1H8Y6P7 765 aaPredicted RBP10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 ARVCFO00192 962 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 DDAH1O94760 285 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 POLR2MP0CAP2 368 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MYCLP12524 364 aaPredicted RBP10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 GNAQP50148 359 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 FPGSQ05932 587 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 ITGA7Q13683 1181 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 FAM47CQ5HY64 1035 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 ANKRD33Q7Z3H0 272 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SH3RF1Q7Z6J0 888 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MB21D2Q8IYB1 491 aaPredicted RBP10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SYTL5Q8TDW5 730 aaPredicted RBP10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CUL5Q93034 780 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TRIM43Q96BQ3 446 aaPredicted RBP10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TOX2Q96NM4 488 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TAAR1Q96RJ0 339 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 IWS1Q96ST2 819 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LZTS2Q9BRK4 669 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MYL10Q9BUA6 226 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SENP2Q9HC62 589 aa10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 NAP1L2Q9ULW6 460 aaPredicted RBP10.76□□□□□ -0.69
CHRFAM7A-204ENST00000562729 KIAA0355O15063 1070 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 HOXA13P31271 388 aaPredicted RBP10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 ANTXR2P58335 489 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 FAAP100Q0VG06 881 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TROAPQ12815 778 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 KRT32Q14532 448 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CCSAPQ6IQ19 270 aaPredicted RBP10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 FCHSD1Q86WN1 690 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TMEM199Q8N511 208 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 IGDCC4Q8TDY8 1250 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TBC1D5Q92609 795 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LRCH3Q96II8 777 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 NEK1Q96PY6 1258 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MTG1Q9BT17 334 aaPredicted RBP10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MTA3Q9BTC8 594 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SEZ6LQ9BYH1 1024 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LY9Q9HBG7 655 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MAP3K20Q9NYL2 800 aaKnown RBP10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MRVI1Q9Y6F6 885 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LCTP09848 1927 aa10.75□□□□□ -0.69
CHRFAM7A-204ENST00000562729 RANBP2P49792 3224 aaKnown RBP10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SH2B2O14492 632 aaPredicted RBP10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 KPNA6O60684 536 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 EIF3JO75822 258 aaKnown RBP10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TIMP1P01033 207 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 GH1P01241 217 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 RXRAP19793 462 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PTGS1P23219 599 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 EDNRBP24530 442 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PSMC6P62333 389 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 NECTIN1Q15223 517 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SAMD3Q8N6K7 520 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SMARCC2Q8TAQ2 1214 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 RNPC3Q96LT9 517 aaKnown RBP10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 KCNK17Q96T54 332 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MAP3K14Q99558 947 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LRRC2Q9BYS8 371 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PPP1R12CQ9BZL4 782 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 RIOX1Q9H6W3 641 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PXMP2Q9NR77 195 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 NOD1Q9Y239 953 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LTBP2Q14767 1821 aa10.74□□□□□ -0.69
CHRFAM7A-204ENST00000562729 RBM47A0AV96 593 aaKnown RBP10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SOX1O00570 391 aaPredicted RBP10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PPP1R11O60927 126 aaPredicted RBP10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 REC8O95072 547 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CENPBP07199 599 aaPredicted RBP10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 NR3C2P08235 984 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 HMGB1P09429 215 aaKnown RBP10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SUPT20HL2P0C7V6 817 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CCND2P30279 289 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LIFRP42702 1097 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms