RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 ARHGAP20Q9P2F6 1191 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 CEP83Q9Y592 693 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 hCG_1642624A0A1W2PR95 340 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 CYP7A1P22680 504 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 MAGEA1P43355 309 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 SRBD1Q8N5C6 995 aaKnown RBP20.62■□□□□ 0.89
BBS4-204ENST00000562084 C7orf25Q9BPX7 421 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 NUCKS1Q9H1E3 243 aaKnown RBP20.62■□□□□ 0.89
BBS4-204ENST00000562084 TRMT112Q9UI30 125 aaKnown RBP20.62■□□□□ 0.89
BBS4-204ENST00000562084 ZNF233A6NK53 670 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 KIF5BP33176 963 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 EIF4A3P38919 411 aaKnown RBP20.61■□□□□ 0.89
BBS4-204ENST00000562084 MATR3P43243 847 aaKnown RBP eCLIP20.61■□□□□ 0.89
BBS4-204ENST00000562084 AMPD3Q01432 767 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 TTC19Q6DKK2 380 aaPredicted RBP20.61■□□□□ 0.89
BBS4-204ENST00000562084 TYW1BQ6NUM6 668 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 CNNM4Q6P4Q7 775 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 C2CD5Q86YS7 1000 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 MYCBPAPQ8TBZ2 947 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 MAGEC3Q8TD91 643 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 CCT8L2Q96SF2 557 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 TLR10Q9BXR5 811 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 RBM12Q9NTZ6 932 aaKnown RBP20.61■□□□□ 0.89
BBS4-204ENST00000562084 PCDHA4Q9UN74 947 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 SIK3Q9Y2K2 1263 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 QSER1Q2KHR3 1735 aa20.61■□□□□ 0.89
BBS4-204ENST00000562084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.6■□□□□ 0.89
BBS4-204ENST00000562084 GOLGA6L10A6NI86 522 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 RBAK-RBAKDNI3L0D1 243 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 ORC4O43929 436 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 KLK7P49862 253 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 CCDC40Q4G0X9 1142 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 PREPLQ4J6C6 727 aaPredicted RBP20.6■□□□□ 0.89
BBS4-204ENST00000562084 VWA3BQ502W6 1294 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 ANKRD40Q6AI12 368 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 ARMC9Q7Z3E5 817 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 KRT26Q7Z3Y9 468 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 SYNE4Q8N205 404 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 GIMAP7Q8NHV1 300 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 SMCR8Q8TEV9 937 aaPredicted RBP20.6■□□□□ 0.89
BBS4-204ENST00000562084 P3H4Q92791 437 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 KLC4Q9NSK0 619 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 MYO1FO00160 1098 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 CES2O00748 559 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 RASSF9O75901 435 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 HSPA9P38646 679 aaKnown RBP20.6■□□□□ 0.89
BBS4-204ENST00000562084 PSEN1P49768 467 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 ATP1A2P50993 1020 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 CDR1P51861 262 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 TRAPPC3LQ5T215 181 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 FOXR2Q6PJQ5 311 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 C6orf89Q6UWU4 347 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 MIGA1Q8NAN2 632 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 DAGLBQ8NCG7 672 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 ARHGEF1Q92888 912 aaKnown RBP20.6■□□□□ 0.89
BBS4-204ENST00000562084 RABEP2Q9H5N1 569 aa20.6■□□□□ 0.89
BBS4-204ENST00000562084 HEXIM1O94992 359 aaKnown RBP20.59■□□□□ 0.89
BBS4-204ENST00000562084 KRT14P02533 472 aa20.59■□□□□ 0.89
BBS4-204ENST00000562084 PDE4DQ08499 809 aa20.59■□□□□ 0.89
BBS4-204ENST00000562084 MAN2A1Q16706 1144 aa20.59■□□□□ 0.89
BBS4-204ENST00000562084 KLHDC7AQ5VTJ3 777 aa20.59■□□□□ 0.89
BBS4-204ENST00000562084 ERVV-1B6SEH8 477 aa20.58■□□□□ 0.89
BBS4-204ENST00000562084 ITGB3BPQ13352 177 aaPredicted RBP20.58■□□□□ 0.89
BBS4-204ENST00000562084 WLSQ5T9L3 541 aa20.58■□□□□ 0.89
BBS4-204ENST00000562084 SH2D3CQ8N5H7 860 aa20.58■□□□□ 0.89
BBS4-204ENST00000562084 PIK3R5Q8WYR1 880 aa20.58■□□□□ 0.89
BBS4-204ENST00000562084 SYN2Q92777 582 aaPredicted RBP20.58■□□□□ 0.89
BBS4-204ENST00000562084 PLCB1Q9NQ66 1216 aa20.58■□□□□ 0.89
BBS4-204ENST00000562084 CCDC194A0A1B0GVG4 234 aa20.58■□□□□ 0.88
BBS4-204ENST00000562084 TNNC1P63316 161 aa20.58■□□□□ 0.88
BBS4-204ENST00000562084 HLFQ16534 295 aa20.58■□□□□ 0.88
BBS4-204ENST00000562084 ASTE1Q2TB18 679 aaPredicted RBP20.58■□□□□ 0.88
BBS4-204ENST00000562084 KCTD16Q68DU8 428 aa20.58■□□□□ 0.88
BBS4-204ENST00000562084 COL23A1Q86Y22 540 aaPredicted RBP20.58■□□□□ 0.88
BBS4-204ENST00000562084 ZKSCAN4Q969J2 545 aaPredicted RBP20.58■□□□□ 0.88
BBS4-204ENST00000562084 JPH2Q9BR39 696 aaPredicted RBP20.58■□□□□ 0.88
BBS4-204ENST00000562084 TRIM9Q9C026 710 aa20.58■□□□□ 0.88
BBS4-204ENST00000562084 NDST4Q9H3R1 872 aa20.58■□□□□ 0.88
BBS4-204ENST00000562084 EPB41L5Q9HCM4 733 aa20.58■□□□□ 0.88
BBS4-204ENST00000562084 TCP11L1Q9NUJ3 509 aa20.58■□□□□ 0.88
BBS4-204ENST00000562084 NFU1Q9UMS0 254 aa20.58■□□□□ 0.88
BBS4-204ENST00000562084 GLI1P08151 1106 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 PLEKP08567 350 aaPredicted RBP20.57■□□□□ 0.88
BBS4-204ENST00000562084 ADRA2BP18089 450 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 CARSP49589 748 aaKnown RBP20.57■□□□□ 0.88
BBS4-204ENST00000562084 GUCY1A3Q02108 690 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 BIRC3Q13489 604 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 CDC37Q16543 378 aaPredicted RBP20.57■□□□□ 0.88
BBS4-204ENST00000562084 RNF187Q5TA31 235 aaPredicted RBP20.57■□□□□ 0.88
BBS4-204ENST00000562084 CENPPQ6IPU0 288 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 CCDC121Q6ZUS5 278 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 CCDC13Q8IYE1 715 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 HELBQ8NG08 1087 aaPredicted RBP20.57■□□□□ 0.88
BBS4-204ENST00000562084 SDR42E1Q8WUS8 393 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 RIOK1Q9BRS2 568 aaKnown RBP20.57■□□□□ 0.88
BBS4-204ENST00000562084 TMBIM4Q9HC24 238 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 MCM8Q9UJA3 840 aa20.57■□□□□ 0.88
BBS4-204ENST00000562084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.57■□□□□ 0.88
BBS4-204ENST00000562084 GUCY2DQ02846 1103 aa20.56■□□□□ 0.88
BBS4-204ENST00000562084 IFFO1Q0D2I5 559 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms