RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 RGS20O76081 388 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 TFRCP02786 760 aaKnown RBP8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 SMPD1P17405 629 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 CCND2P30279 289 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 CLK2P49760 499 aaKnown RBP8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 NKX3-2P78367 333 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 AKAP17AQ02040 695 aaKnown RBP8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 TNFAIP2Q03169 654 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 SSRP1Q08945 709 aaKnown RBP8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 LRRC41Q15345 812 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 STXBP2Q15833 593 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 DUSP28Q4G0W2 176 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 PCNX4Q63HM2 1172 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 REXO1Q8N1G1 1221 aaKnown RBP8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 NECAB1Q8N987 351 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 NSUN7Q8NE18 718 aaKnown RBP8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 INPP4AQ96PE3 977 aaPredicted RBP8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 ANO3Q9BYT9 981 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 SH3GLB2Q9NR46 395 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 VPS54Q9P1Q0 977 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 LIMCH1Q9UPQ0 1083 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 SMCO2A6NFE2 343 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 KBTBD13C9JR72 458 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 NKRFO15226 690 aaKnown RBP eCLIP8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 CTAGE5O15320 804 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 EIF3JO75822 258 aaKnown RBP8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 STAM2O75886 525 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 ARIH2O95376 493 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 CD2BP2O95400 341 aaKnown RBP8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 PGK1P00558 417 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 PTGS1P23219 599 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 SREBF1P36956 1147 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 GJA9P57773 515 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 MRPS9P82933 396 aaKnown RBP8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 NPY5RQ15761 445 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 GJC2Q5T442 439 aaPredicted RBP8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 CCSAPQ6IQ19 270 aaPredicted RBP8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 XRRA1Q6P2D8 792 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 CCDC62Q6P9F0 684 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 RNF180Q86T96 592 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 VSIG10LQ86VR7 867 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 DAGLBQ8NCG7 672 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 ARRDC4Q8NCT1 418 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 KLHDC9Q8NEP7 349 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 PAWRQ96IZ0 340 aaKnown RBP8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 AIFM3Q96NN9 605 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 WDR11Q9BZH6 1224 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 C11orf49Q9H6J7 331 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 C6orf50Q9HD87 102 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 SH2B1Q9NRF2 756 aaPredicted RBP8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 PHF24Q9UPV7 400 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 Q9Y3F1 56 aa8.16□□□□□ -1.1
TUBGCP4-203ENST00000562053 TANC1Q9C0D5 1861 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 MOXD2PA6NHM9 499 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 ADAMTS3O15072 1205 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 JAK2O60674 1132 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 FOSP01100 380 aaPredicted RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 C6orf222P0C671 652 aaPredicted RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 TXNP10599 105 aaKnown RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 MYCLP12524 364 aaPredicted RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 FDPSP14324 419 aaKnown RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 UBA1P22314 1058 aaKnown RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 GNA11P29992 359 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 MLLT1Q03111 559 aaPredicted RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 SEMA3FQ13275 785 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 TTLL4Q14679 1199 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 GNPTABQ3T906 1256 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 TMEM63BQ5T3F8 832 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 MCTP2Q6DN12 878 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 IQSEC1Q6DN90 963 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 NECAB2Q7Z6G3 386 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 CCDC83Q8IWF9 413 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 BICD2Q8TD16 824 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 CRYGNQ8WXF5 182 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 EMID1Q96A84 441 aaPredicted RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 GPRASP2Q96D09 838 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 PGBD1Q96JS3 809 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 ZSCAN31Q96LW9 406 aaPredicted RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 PHF20Q9BVI0 1012 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 EHMT1Q9H9B1 1298 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 TMEM260Q9NX78 707 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 ORC3Q9UBD5 711 aaPredicted RBP8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 PCDHA6Q9UN73 950 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 PCDHA8Q9Y5H6 950 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 MRVI1Q9Y6F6 885 aa8.15□□□□□ -1.1
TUBGCP4-203ENST00000562053 DNAH12Q6ZR08 3092 aa8.15□□□□□ -1.11
TUBGCP4-203ENST00000562053 A0A1W2PQ45 241 aaPredicted RBP8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 A0A1W2PQY0 241 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 M0R2N6 131 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 FIBPO43427 364 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 DTNBO60941 627 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 ITGB5P18084 799 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 ICAM3P32942 547 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 ACLYP53396 1101 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 IRX5P78411 483 aaPredicted RBP8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 ARHGAP1Q07960 439 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 SNX17Q15036 470 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 FSCN1Q16658 493 aaKnown RBP8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 GALNT17Q6IS24 598 aa8.14□□□□□ -1.11
TUBGCP4-203ENST00000562053 KCNV1Q6PIU1 500 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms