RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 TMEM87AQ8NBN3 555 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 BICD2Q8TD16 824 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 MAF1Q9H063 256 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 RNF208Q9H0X6 261 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 FRMPD3Q5JV73 1810 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 RPTORQ8N122 1335 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 PIK3CDO00329 1044 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 ZNF865P0CJ78 1059 aaPredicted RBP25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 MSL3Q8N5Y2 521 aaKnown RBP25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 DNERQ8NFT8 737 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 IL31RAQ8NI17 732 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 MORC4Q8TE76 937 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 RIC8AQ9NPQ8 531 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 PXMP2Q9NR77 195 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 MAP3K20Q9NYL2 800 aaKnown RBP25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 TFIP11Q9UBB9 837 aaKnown RBP25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 ADD3Q9UEY8 706 aaKnown RBP25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 MKI67P46013 3256 aaKnown RBP25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 KIAA0100Q14667 2235 aaKnown RBP25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 CCDC85CA6NKD9 419 aa25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 EDNRBP24530 442 aa25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 RILPL1Q5EBL4 403 aa25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 TNFRSF25Q93038 417 aa25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 ZFP91Q96JP5 570 aaPredicted RBP25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 GDPD2Q9HCC8 539 aa25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 HMX1Q9NP08 348 aaPredicted RBP25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 PAK6Q9NQU5 681 aaPredicted RBP25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 TMEM260Q9NX78 707 aa25.59■■□□□ 1.69
SYNGR3-202ENST00000562045 ASB14A6NK59 587 aa25.58■■□□□ 1.69
SYNGR3-202ENST00000562045 FBXO16Q8IX29 292 aaPredicted RBP25.58■■□□□ 1.69
SYNGR3-202ENST00000562045 SAMD3Q8N6K7 520 aa25.58■■□□□ 1.69
SYNGR3-202ENST00000562045 PGBD1Q96JS3 809 aa25.58■■□□□ 1.69
SYNGR3-202ENST00000562045 USP28Q96RU2 1077 aa25.58■■□□□ 1.69
SYNGR3-202ENST00000562045 GLT8D2Q9H1C3 349 aa25.58■■□□□ 1.69
SYNGR3-202ENST00000562045 POTEFA5A3E0 1075 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 PRPF40AO75400 957 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 ADCY7P51828 1080 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 ARHGEF16Q5VV41 709 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 NSUN6Q8TEA1 469 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 CUL5Q93034 780 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 M0R2N6 131 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 ADCY6O43306 1168 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 PTGS1P23219 599 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 CNGA1P29973 690 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 ACVR2BQ13705 512 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 NBR1Q14596 966 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 TMEM63BQ5T3F8 832 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 ANO1Q5XXA6 986 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 LENG1Q96BZ8 264 aaPredicted RBP25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 SPATA32Q96LK8 384 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 PDGFCQ9NRA1 345 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 LMBRD1Q9NUN5 540 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 POLR3EQ9NVU0 708 aa25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 ZHX1Q9UKY1 873 aaPredicted RBP25.57■■□□□ 1.68
SYNGR3-202ENST00000562045 ELP1O95163 1332 aa25.56■■□□□ 1.68
SYNGR3-202ENST00000562045 KIAA1217Q5T5P2 1943 aa25.56■■□□□ 1.68
SYNGR3-202ENST00000562045 CLK2P49760 499 aaKnown RBP25.56■■□□□ 1.68
SYNGR3-202ENST00000562045 PGM5Q15124 567 aa25.56■■□□□ 1.68
SYNGR3-202ENST00000562045 DEFB118Q96PH6 123 aa25.56■■□□□ 1.68
SYNGR3-202ENST00000562045 PDCD2LQ9BRP1 358 aa25.56■■□□□ 1.68
SYNGR3-202ENST00000562045 RTEL1Q9NZ71 1219 aa25.56■■□□□ 1.68
SYNGR3-202ENST00000562045 MRPL12P52815 198 aaKnown RBP25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 TAPT1Q6NXT6 567 aa25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 REXO1Q8N1G1 1221 aaKnown RBP25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 RASGRP4Q8TDF6 673 aa25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 LEO1Q8WVC0 666 aaPredicted RBP25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 ABHD16BQ9H3Z7 469 aa25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 NOL7Q9UMY1 257 aaKnown RBP25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 PCDHA6Q9UN73 950 aa25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 PCDHA8Q9Y5H6 950 aa25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 FRMPD4Q14CM0 1322 aa25.55■■□□□ 1.68
SYNGR3-202ENST00000562045 SOX10P56693 466 aa25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 CEBPZQ03701 1054 aaKnown RBP25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 LHX8Q68G74 356 aa25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 PIK3AP1Q6ZUJ8 805 aa25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 FTOQ9C0B1 505 aaKnown RBP eCLIP25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 CCDC194A0A1B0GVG4 234 aa25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 NR3C2P08235 984 aa25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 NASPP49321 788 aaPredicted RBP25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 PDE4DQ08499 809 aa25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 KRT25Q7Z3Z0 450 aa25.54■■□□□ 1.68
SYNGR3-202ENST00000562045 YEATS4O95619 227 aa25.53■■□□□ 1.68
SYNGR3-202ENST00000562045 MYCLP12524 364 aaPredicted RBP25.53■■□□□ 1.68
SYNGR3-202ENST00000562045 TRAPPC10P48553 1259 aa25.53■■□□□ 1.68
SYNGR3-202ENST00000562045 CCDC144BQ3MJ40 725 aa25.53■■□□□ 1.68
SYNGR3-202ENST00000562045 EARS2Q5JPH6 523 aaKnown RBP25.53■■□□□ 1.68
SYNGR3-202ENST00000562045 JAKMIP3Q5VZ66 844 aa25.53■■□□□ 1.68
SYNGR3-202ENST00000562045 RCOR1Q9UKL0 485 aa25.53■■□□□ 1.68
SYNGR3-202ENST00000562045 MYH15Q9Y2K3 1946 aa25.53■■□□□ 1.68
SYNGR3-202ENST00000562045 SEPT4O43236 478 aa25.52■■□□□ 1.68
SYNGR3-202ENST00000562045 GJB1P08034 283 aa25.52■■□□□ 1.68
SYNGR3-202ENST00000562045 ADCYAP1R1P41586 468 aa25.52■■□□□ 1.68
SYNGR3-202ENST00000562045 TEX2Q8IWB9 1127 aa25.52■■□□□ 1.68
SYNGR3-202ENST00000562045 IWS1Q96ST2 819 aa25.52■■□□□ 1.68
SYNGR3-202ENST00000562045 DDX20Q9UHI6 824 aaKnown RBP25.52■■□□□ 1.68
SYNGR3-202ENST00000562045 NRBP1Q9UHY1 535 aa25.52■■□□□ 1.68
SYNGR3-202ENST00000562045 CLIC4Q9Y696 253 aa25.52■■□□□ 1.68
SYNGR3-202ENST00000562045 MYH7BA7E2Y1 1941 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms