RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 PFKMP08237 780 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 SUPT20HL2P0C7V6 817 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 ANTXR2P58335 489 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 IRX6P78412 446 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 PTPN11Q06124 597 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 ADGRE1Q14246 886 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 GRM4Q14833 912 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 RAB30Q15771 203 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 BRDTQ58F21 947 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 FAM47CQ5HY64 1035 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 SESTD1Q86VW0 696 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 MCF2L2Q86YR7 1114 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 IL31RAQ8NI17 732 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 AFG1LQ8WV93 481 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 DHX38Q92620 1227 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 KAT2BQ92831 832 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 IWS1Q96ST2 819 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 PDCD2LQ9BRP1 358 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 AMNQ9BXJ7 453 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 PRDM12Q9H4Q4 367 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 FRMPD4Q14CM0 1322 aa11.82□□□□□ -0.52
SNRPA1-212ENST00000560496 B4DLN1 442 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 KPNA6O60684 536 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 F2P00734 622 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 CFBP00751 764 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 HOXD8P13378 290 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 MRPL12P52815 198 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 RABGGTBP53611 331 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 RBL2Q08999 1139 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 TROAPQ12815 778 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 STXBP2Q15833 593 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 ARHGEF16Q5VV41 709 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 GDF6Q6KF10 455 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 SEPT14Q6ZU15 432 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 MB21D2Q8IYB1 491 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 EMID1Q96A84 441 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 RIOX1Q9H6W3 641 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 VAT1LQ9HCJ6 419 aa11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-212ENST00000560496 ATG2AQ2TAZ0 1938 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 E7EWF7 191 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 RBAK-RBAKDNI3L0D1 243 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 NR3C2P08235 984 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 ZNF286BP0CG31 522 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 MYOGP15173 224 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 COL9A3Q14050 684 aaPredicted RBP11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 PGM5Q15124 567 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 DEFB128Q7Z7B8 93 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 HOMER1Q86YM7 354 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 RPUSD2Q8IZ73 545 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 PIGSQ96S52 555 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 PRDM6Q9NQX0 595 aa11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 DDX41Q9UJV9 622 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-212ENST00000560496 COL4A6Q14031 1691 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 HAS3O00219 553 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 IFIT3O14879 490 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 ARHGEF15O94989 841 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 CENPBP07199 599 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 IQCF3P0C7M6 154 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 ATP2A2P16615 1042 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 UBA1P22314 1058 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 HOXA13P31271 388 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 RFC2P35250 354 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 TRDNQ13061 729 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 GPNMBQ14956 572 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 WTAPQ15007 396 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 PPP2R2DQ66LE6 453 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 CHST3Q7LGC8 479 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 PPTC7Q8NI37 304 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 GPKOWQ92917 476 aaPredicted RBP eCLIP11.79□□□□□ -0.524e-9■■■□□ 16.8
SNRPA1-212ENST00000560496 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 GTF2IRD1Q9UHL9 959 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 MSRAQ9UJ68 235 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 PCDHA11Q9Y5I1 949 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 PCDHA1Q9Y5I3 950 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 SLC4A7Q9Y6M7 1214 aa11.79□□□□□ -0.52
SNRPA1-212ENST00000560496 NLRC5Q86WI3 1866 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 EIF3JO75822 258 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 HIC1Q14526 733 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 PTGISQ16647 500 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 DGKDQ16760 1214 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 TCTN1Q2MV58 587 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 TRIM71Q2Q1W2 868 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 HSDL1Q3SXM5 330 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 TRAF7Q6Q0C0 670 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 RALYLQ86SE5 291 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 SAMD3Q8N6K7 520 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 NCOA7Q8NI08 942 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 WNT8BQ93098 351 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 SLC28A3Q9HAS3 691 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
SNRPA1-212ENST00000560496 HDAC6Q9UBN7 1215 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms