RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 SLC9A7Q96T83 725 aa13□□□□□ -0.33
HERC1-204ENST00000559715 UHRF1Q96T88 793 aaPredicted RBP13□□□□□ -0.33
HERC1-204ENST00000559715 JMJD4Q9H9V9 463 aa13□□□□□ -0.33
HERC1-204ENST00000559715 CERS4Q9HA82 394 aa13□□□□□ -0.33
HERC1-204ENST00000559715 ZSWIM5Q9P217 1185 aa13□□□□□ -0.33
HERC1-204ENST00000559715 DDX41Q9UJV9 622 aaKnown RBP13□□□□□ -0.33
HERC1-204ENST00000559715 MICAL3Q7RTP6 2002 aa13□□□□□ -0.33
HERC1-204ENST00000559715 DOCK5Q9H7D0 1870 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 SIP14410 1827 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 MYO7AQ13402 2215 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 HAS3O00219 553 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 PPP1R11O60927 126 aaPredicted RBP12.99□□□□□ -0.33
HERC1-204ENST00000559715 NBNO60934 754 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 KDM4AO75164 1064 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 IGHDP01880 384 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 CXCL10P02778 98 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 HOXD8P13378 290 aaPredicted RBP12.99□□□□□ -0.33
HERC1-204ENST00000559715 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
HERC1-204ENST00000559715 MBTPS1Q14703 1052 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 CDC37Q16543 378 aaPredicted RBP12.99□□□□□ -0.33
HERC1-204ENST00000559715 QRICH1Q2TAL8 776 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 FAM47CQ5HY64 1035 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 TMCO2Q7Z6W1 182 aaPredicted RBP12.99□□□□□ -0.33
HERC1-204ENST00000559715 ESR2Q92731 530 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 EMID1Q96A84 441 aaPredicted RBP12.99□□□□□ -0.33
HERC1-204ENST00000559715 MTMR8Q96EF0 704 aa12.99□□□□□ -0.33
HERC1-204ENST00000559715 B4E1Z4 1266 aa12.98□□□□□ -0.33
HERC1-204ENST00000559715 WDR5P61964 334 aaKnown RBP12.98□□□□□ -0.33
HERC1-204ENST00000559715 DEFB103AP81534 67 aa12.98□□□□□ -0.33
HERC1-204ENST00000559715 PTGISQ16647 500 aa12.98□□□□□ -0.33
HERC1-204ENST00000559715 SEPT14Q6ZU15 432 aa12.98□□□□□ -0.33
HERC1-204ENST00000559715 STAG2Q8N3U4 1231 aa12.98□□□□□ -0.33
HERC1-204ENST00000559715 NSUN6Q8TEA1 469 aaKnown RBP12.98□□□□□ -0.33
HERC1-204ENST00000559715 IWS1Q96ST2 819 aa12.98□□□□□ -0.33
HERC1-204ENST00000559715 GPHNQ9NQX3 736 aaPredicted RBP12.98□□□□□ -0.33
HERC1-204ENST00000559715 GTF2IRD1Q9UHL9 959 aa12.98□□□□□ -0.33
HERC1-204ENST00000559715 PIEZO1Q92508 2521 aa12.98□□□□□ -0.33
HERC1-204ENST00000559715 ABCB11O95342 1321 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 ZNF213O14771 459 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 TLL1O43897 1013 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 BAIAP3O94812 1187 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 GH1P01241 217 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 HSD17B4P51659 736 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 NUCB1Q02818 461 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 GRB10Q13322 594 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 BFSP2Q13515 415 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 SEC23AQ15436 765 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 AFAP1L1Q8TED9 768 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 ZSCAN10Q96SZ4 725 aaPredicted RBP12.97□□□□□ -0.33
HERC1-204ENST00000559715 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
HERC1-204ENST00000559715 HDAC6Q9UBN7 1215 aa12.97□□□□□ -0.33
HERC1-204ENST00000559715 ATG2AQ2TAZ0 1938 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 RAD50Q92878 1312 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 F2P00734 622 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 NR3C2P08235 984 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 CKBP12277 381 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 ACTN1P12814 892 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 SELPP16109 830 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 ZNF200P98182 395 aaPredicted RBP12.96□□□□□ -0.33
HERC1-204ENST00000559715 SP2Q02086 613 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 STXBP2Q15833 593 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 ASPRV1Q53RT3 343 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 BRDTQ58F21 947 aaPredicted RBP12.96□□□□□ -0.33
HERC1-204ENST00000559715 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.33
HERC1-204ENST00000559715 STOX1Q6ZVD7 989 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 RETREG2Q8NC44 543 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 CAGE1Q8TC20 777 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.334e-9■□□□□ 10.1
HERC1-204ENST00000559715 RILPL2Q969X0 211 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 DSCC1Q9BVC3 393 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 OSBPL7Q9BZF2 842 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 BCAS3Q9H6U6 928 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 PXMP2Q9NR77 195 aa12.96□□□□□ -0.33
HERC1-204ENST00000559715 EIF3JO75822 258 aaKnown RBP12.95□□□□□ -0.34
HERC1-204ENST00000559715 HOXC8P31273 242 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 NT5C2P49902 561 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 MYSM1Q5VVJ2 828 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 CYB5R4Q7L1T6 521 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 LRRC8DQ7L1W4 858 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 CHST3Q7LGC8 479 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 FBXO11Q86XK2 927 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 MICALL1Q8N3F8 863 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 IL31RAQ8NI17 732 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 ARNTL2Q8WYA1 636 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 MPHOSPH6Q99547 160 aaKnown RBP12.95□□□□□ -0.34
HERC1-204ENST00000559715 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.34
HERC1-204ENST00000559715 MAD2L2Q9UI95 211 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 MUC6Q6W4X9 2439 aa12.95□□□□□ -0.34
HERC1-204ENST00000559715 PALM3A6NDB9 673 aaPredicted RBP12.94□□□□□ -0.34
HERC1-204ENST00000559715 B4DLN1 442 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 GJB5O95377 273 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 EIF2AK2P19525 551 aaKnown RBP12.94□□□□□ -0.34
HERC1-204ENST00000559715 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
HERC1-204ENST00000559715 PSEN2P49810 448 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 MRPL12P52815 198 aaKnown RBP12.94□□□□□ -0.34
HERC1-204ENST00000559715 DGKDQ16760 1214 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms