RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PGBD1Q96JS3 809 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 LLPHQ9BRT6 129 aaKnown RBP23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 WDR11Q9BZH6 1224 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 GJB4Q9NTQ9 266 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 GNEQ9Y223 722 aaKnown RBP23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 FRMPD3Q5JV73 1810 aa23.24■■□□□ 1.31
TSPAN3-207ENST00000559494 PGK1P00558 417 aa23.24■■□□□ 1.31
TSPAN3-207ENST00000559494 GJC2Q5T442 439 aaPredicted RBP23.24■■□□□ 1.31
TSPAN3-207ENST00000559494 UBE2Q1Q7Z7E8 422 aa23.24■■□□□ 1.31
TSPAN3-207ENST00000559494 SCFD2Q8WU76 684 aa23.24■■□□□ 1.31
TSPAN3-207ENST00000559494 ALG1Q9BT22 464 aa23.24■■□□□ 1.31
TSPAN3-207ENST00000559494 XPNPEP3Q9NQH7 507 aa23.24■■□□□ 1.31
TSPAN3-207ENST00000559494 KCNJ14Q9UNX9 436 aa23.24■■□□□ 1.31
TSPAN3-207ENST00000559494 KIAA1217Q5T5P2 1943 aa23.24■■□□□ 1.31
TSPAN3-207ENST00000559494 ARIH2O95376 493 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 IRX5P78411 483 aaPredicted RBP23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 AP3B2Q13367 1082 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 LRRC41Q15345 812 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 NPY5RQ15761 445 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 DUSP28Q4G0W2 176 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 PCNX4Q63HM2 1172 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 CCDC62Q6P9F0 684 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 FAM177A1Q8N128 213 aaPredicted RBP23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 ANKLE1Q8NAG6 615 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 ARRDC4Q8NCT1 418 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 RASGRP4Q8TDF6 673 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 DIS3LQ8TF46 1054 aaKnown RBP23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 WASF1Q92558 559 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 ANO3Q9BYT9 981 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 RTEL1Q9NZ71 1219 aa23.23■■□□□ 1.31
TSPAN3-207ENST00000559494 ADAMTS4O75173 837 aa23.22■■□□□ 1.31
TSPAN3-207ENST00000559494 REXO1Q8N1G1 1221 aaKnown RBP23.22■■□□□ 1.31
TSPAN3-207ENST00000559494 BICD2Q8TD16 824 aa23.22■■□□□ 1.31
TSPAN3-207ENST00000559494 PHF20Q9BVI0 1012 aa23.22■■□□□ 1.31
TSPAN3-207ENST00000559494 PCDHA4Q9UN74 947 aa23.22■■□□□ 1.31
TSPAN3-207ENST00000559494 SYNRGQ9UMZ2 1314 aa23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 DYNC1LI2O43237 492 aaPredicted RBP23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 FARP2O94887 1054 aaPredicted RBP23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 TXNP10599 105 aaKnown RBP23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 GJA9P57773 515 aa23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 XRRA1Q6P2D8 792 aa23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 COPS5Q92905 334 aa23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 PAWRQ96IZ0 340 aaKnown RBP23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 UPF3AQ9H1J1 476 aaKnown RBP23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 Q9Y3F1 56 aa23.21■■□□□ 1.31
TSPAN3-207ENST00000559494 MYADML2A6NDP7 307 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 M0R2N6 131 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 CTAGE5O15320 804 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 STAM2O75886 525 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 MYCNP04198 464 aaPredicted RBP23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 TTLL4Q14679 1199 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 LY6KQ17RY6 165 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 MCTP2Q6DN12 878 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 GALNT17Q6IS24 598 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 BLIDQ8IZY5 108 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 DAGLBQ8NCG7 672 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 KLHDC9Q8NEP7 349 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 INPP4AQ96PE3 977 aaPredicted RBP23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 EHMT1Q9H9B1 1298 aa23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 DDX41Q9UJV9 622 aaKnown RBP23.2■■□□□ 1.3
TSPAN3-207ENST00000559494 XBP1P17861 261 aa23.19■■□□□ 1.3
TSPAN3-207ENST00000559494 SREBF1P36956 1147 aa23.19■■□□□ 1.3
TSPAN3-207ENST00000559494 NKX3-2P78367 333 aa23.19■■□□□ 1.3
TSPAN3-207ENST00000559494 TLK2Q86UE8 772 aa23.19■■□□□ 1.3
TSPAN3-207ENST00000559494 DNM1LO00429 736 aa23.18■■□□□ 1.3
TSPAN3-207ENST00000559494 NKRFO15226 690 aaKnown RBP eCLIP23.18■■□□□ 1.32e-6■□□□□ 8.4
TSPAN3-207ENST00000559494 SEMA3FQ13275 785 aa23.18■■□□□ 1.3
TSPAN3-207ENST00000559494 CCSAPQ6IQ19 270 aaPredicted RBP23.18■■□□□ 1.3
TSPAN3-207ENST00000559494 RNF180Q86T96 592 aa23.18■■□□□ 1.3
TSPAN3-207ENST00000559494 CRYGNQ8WXF5 182 aa23.18■■□□□ 1.3
TSPAN3-207ENST00000559494 AP5M1Q9H0R1 490 aa23.18■■□□□ 1.3
TSPAN3-207ENST00000559494 UBIAD1Q9Y5Z9 338 aa23.18■■□□□ 1.3
TSPAN3-207ENST00000559494 MRVI1Q9Y6F6 885 aa23.18■■□□□ 1.3
TSPAN3-207ENST00000559494 SPATA31C2B4DYI2 1134 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 EDIL3O43854 480 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 C6orf222P0C671 652 aaPredicted RBP23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 COL6A1P12109 1028 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 ITGB5P18084 799 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 ICAM3P32942 547 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 FOSBP53539 338 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 HMGN5P82970 282 aaKnown RBP23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 ARHGAP4P98171 946 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 BEX3Q00994 111 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 SP2Q02086 613 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 NECAB2Q7Z6G3 386 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 SPC25Q9HBM1 224 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 MYH7BA7E2Y1 1941 aa23.17■■□□□ 1.3
TSPAN3-207ENST00000559494 TGFB3P10600 412 aa23.16■■□□□ 1.3
TSPAN3-207ENST00000559494 CST5P28325 142 aaPredicted RBP23.16■■□□□ 1.3
TSPAN3-207ENST00000559494 KCNA10Q16322 511 aa23.16■■□□□ 1.3
TSPAN3-207ENST00000559494 GNPTABQ3T906 1256 aa23.16■■□□□ 1.3
TSPAN3-207ENST00000559494 GNASQ5JWF2 1037 aa23.16■■□□□ 1.3
TSPAN3-207ENST00000559494 KCNV1Q6PIU1 500 aa23.16■■□□□ 1.3
TSPAN3-207ENST00000559494 OR6J1Q8NGC5 347 aa23.16■■□□□ 1.3
TSPAN3-207ENST00000559494 CYP2W1Q8TAV3 490 aa23.16■■□□□ 1.3
TSPAN3-207ENST00000559494 OXER1Q8TDS5 423 aa23.16■■□□□ 1.3
TSPAN3-207ENST00000559494 DNAH12Q6ZR08 3092 aa23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 KBTBD13C9JR72 458 aa23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 CYP3A4P08684 503 aa23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 ARHGAP1Q07960 439 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms