RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 NKX2-4Q9H2Z4 354 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 ZNF576Q9H609 170 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 RIOX1Q9H6W3 641 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 PRDM6Q9NQX0 595 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 MRPL11Q9Y3B7 192 aaKnown RBP15.78■□□□□ 0.12
VPS18-203ENST00000558855 RBM8AQ9Y5S9 174 aaKnown RBP15.78■□□□□ 0.12
VPS18-203ENST00000558855 TRANK1O15050 2925 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 SIP14410 1827 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 TMEM265A0A087WTH1 108 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 ZBTB5O15062 677 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 ARHGEF15O94989 841 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 FGBP02675 491 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 NR3C2P08235 984 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 CHMP4BP1P59074 171 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 ADGRE1Q14246 886 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 HIC1Q14526 733 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 GPNMBQ14956 572 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 TCTN1Q2MV58 587 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 GDF6Q6KF10 455 aaPredicted RBP15.77■□□□□ 0.12
VPS18-203ENST00000558855 DEFB128Q7Z7B8 93 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 IGDCC4Q8TDY8 1250 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 PIBF1Q8WXW3 757 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 PDCD2LQ9BRP1 358 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 LSG1Q9H089 658 aaKnown RBP15.77■□□□□ 0.12
VPS18-203ENST00000558855 DDX41Q9UJV9 622 aaKnown RBP15.77■□□□□ 0.12
VPS18-203ENST00000558855 TELO2Q9Y4R8 837 aa15.77■□□□□ 0.12
VPS18-203ENST00000558855 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
VPS18-203ENST00000558855 SP2Q02086 613 aa15.76■□□□□ 0.11
VPS18-203ENST00000558855 ARHGEF16Q5VV41 709 aa15.76■□□□□ 0.11
VPS18-203ENST00000558855 WNT8BQ93098 351 aa15.76■□□□□ 0.11
VPS18-203ENST00000558855 PRDM12Q9H4Q4 367 aa15.76■□□□□ 0.11
VPS18-203ENST00000558855 LY9Q9HBG7 655 aa15.76■□□□□ 0.11
VPS18-203ENST00000558855 PCDHA1Q9Y5I3 950 aa15.76■□□□□ 0.11
VPS18-203ENST00000558855 CUL9Q8IWT3 2517 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 GH1P01241 217 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 ZNF286BP0CG31 522 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 MYCLP12524 364 aaPredicted RBP15.75■□□□□ 0.11
VPS18-203ENST00000558855 WTAPQ15007 396 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 PGM5Q15124 567 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 STXBP2Q15833 593 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 TMEM67Q5HYA8 995 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 NFRKBQ6P4R8 1299 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 SPRED2Q7Z698 418 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 MCF2L2Q86YR7 1114 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 RAB11FIP4Q86YS3 637 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 NCOA7Q8NI08 942 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 RUFY2Q8WXA3 655 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 IWS1Q96ST2 819 aa15.75■□□□□ 0.11
VPS18-203ENST00000558855 PLEKHA8P1O95397 391 aa15.74■□□□□ 0.11
VPS18-203ENST00000558855 RXRAP19793 462 aa15.74■□□□□ 0.11
VPS18-203ENST00000558855 ZNF200P98182 395 aaPredicted RBP15.74■□□□□ 0.11
VPS18-203ENST00000558855 SEMA3FQ13275 785 aa15.74■□□□□ 0.11
VPS18-203ENST00000558855 RALYLQ86SE5 291 aaKnown RBP15.74■□□□□ 0.11
VPS18-203ENST00000558855 SEZ6LQ9BYH1 1024 aa15.74■□□□□ 0.11
VPS18-203ENST00000558855 MICAL3Q7RTP6 2002 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 FRMPD4Q14CM0 1322 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 HAS3O00219 553 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 EIF3JO75822 258 aaKnown RBP15.73■□□□□ 0.11
VPS18-203ENST00000558855 IQCF3P0C7M6 154 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 MRPS9P82933 396 aaKnown RBP15.73■□□□□ 0.11
VPS18-203ENST00000558855 TRDNQ13061 729 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 HSDL1Q3SXM5 330 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 FCHSD1Q86WN1 690 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 CMTR1Q8N1G2 835 aaKnown RBP15.73■□□□□ 0.11
VPS18-203ENST00000558855 MPHOSPH6Q99547 160 aaKnown RBP15.73■□□□□ 0.11
VPS18-203ENST00000558855 ESYT1Q9BSJ8 1104 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 LRRC2Q9BYS8 371 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 MAF1Q9H063 256 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 HDAC6Q9UBN7 1215 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
VPS18-203ENST00000558855 ZBBXA8MT70 800 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 SH2B2O14492 632 aaPredicted RBP15.72■□□□□ 0.11
VPS18-203ENST00000558855 SLC27A2O14975 620 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 PRC1O43663 620 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 KPNA6O60684 536 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 F2P00734 622 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 UBA1P22314 1058 aaKnown RBP15.72■□□□□ 0.11
VPS18-203ENST00000558855 PSEN2P49810 448 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 TRIM71Q2Q1W2 868 aaKnown RBP15.72■□□□□ 0.11
VPS18-203ENST00000558855 TRAF7Q6Q0C0 670 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 TMCO2Q7Z6W1 182 aaPredicted RBP15.72■□□□□ 0.11
VPS18-203ENST00000558855 VSIG10LQ86VR7 867 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 ZNF654Q8IZM8 581 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 EMID1Q96A84 441 aaPredicted RBP15.72■□□□□ 0.11
VPS18-203ENST00000558855 ALG1Q9BT22 464 aa15.72■□□□□ 0.11
VPS18-203ENST00000558855 PNMA6FA0A0J9YX94 578 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 hCG_1642624A0A1W2PR95 340 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 EPOPA6NHQ4 379 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 B4DLN1 442 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 GGPS1O95749 300 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 SUPT20HL2P0C7V6 817 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 HOXD8P13378 290 aaPredicted RBP15.71■□□□□ 0.11
VPS18-203ENST00000558855 MRPL12P52815 198 aaKnown RBP15.71■□□□□ 0.11
VPS18-203ENST00000558855 PTPN11Q06124 597 aaPredicted RBP15.71■□□□□ 0.11
VPS18-203ENST00000558855 PTGISQ16647 500 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 BRDTQ58F21 947 aaPredicted RBP15.71■□□□□ 0.11
VPS18-203ENST00000558855 MYSM1Q5VVJ2 828 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 SESTD1Q86VW0 696 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 SRBD1Q8N5C6 995 aaKnown RBP15.71■□□□□ 0.11
VPS18-203ENST00000558855 OSBPL7Q9BZF2 842 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms