RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ACLYP53396 1101 aa15.91■□□□□ 0.14
TSPAN3-205ENST00000558745 SLC39A5Q6ZMH5 540 aa15.91■□□□□ 0.14
TSPAN3-205ENST00000558745 C7orf61Q8IZ16 206 aa15.91■□□□□ 0.14
TSPAN3-205ENST00000558745 CUL5Q93034 780 aa15.91■□□□□ 0.14
TSPAN3-205ENST00000558745 AP5M1Q9H0R1 490 aa15.91■□□□□ 0.14
TSPAN3-205ENST00000558745 BCAS3Q9H6U6 928 aa15.91■□□□□ 0.14
TSPAN3-205ENST00000558745 TMEM260Q9NX78 707 aa15.91■□□□□ 0.14
TSPAN3-205ENST00000558745 BARHL2Q9NY43 387 aa15.91■□□□□ 0.14
TSPAN3-205ENST00000558745 PHF24Q9UPV7 400 aa15.91■□□□□ 0.14
TSPAN3-205ENST00000558745 ALPK3Q96L96 1907 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 H0YGN5 161 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 PIK3CDO00329 1044 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 EIF3JO75822 258 aaKnown RBP15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 ASGR1P07306 291 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 MRPS9P82933 396 aaKnown RBP15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 ME3Q16798 604 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 CCDC62Q6P9F0 684 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 SCFD2Q8WU76 684 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 AIFM3Q96NN9 605 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 SLKQ9H2G2 1235 aaPredicted RBP15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 SPC25Q9HBM1 224 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 PCDHA6Q9UN73 950 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 PCDHA8Q9Y5H6 950 aa15.9■□□□□ 0.14
TSPAN3-205ENST00000558745 A0A1W2PQ45 241 aaPredicted RBP15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 A0A1W2PQY0 241 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 PFKFB2O60825 505 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 SYN1P17600 705 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 CCND2P30279 289 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 AKAP17AQ02040 695 aaKnown RBP15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 SSRP1Q08945 709 aaKnown RBP15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 TTLL4Q14679 1199 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 CXCL17Q6UXB2 119 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 OR6J1Q8NGC5 347 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 PPP1R13LQ8WUF5 828 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 RIC8AQ9NPQ8 531 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 VPS54Q9P1Q0 977 aa15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 DDX41Q9UJV9 622 aaKnown RBP15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
TSPAN3-205ENST00000558745 CPLX1O14810 134 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 CTDNEP1O95476 244 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 CST5P28325 142 aaPredicted RBP15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 ADCY7P51828 1080 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 RTP1P59025 263 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 SP2Q02086 613 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 FSCN1Q16658 493 aaKnown RBP15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 JAKMIP3Q5VZ66 844 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 VTI1AQ96AJ9 217 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 RNF26Q9BY78 433 aaPredicted RBP15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 ATP11BQ9Y2G3 1177 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 Q9Y3F1 56 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 MRVI1Q9Y6F6 885 aa15.88■□□□□ 0.13
TSPAN3-205ENST00000558745 PSMC6P62333 389 aa15.87■□□□□ 0.13
TSPAN3-205ENST00000558745 NKX3-2P78367 333 aa15.87■□□□□ 0.13
TSPAN3-205ENST00000558745 ANKRD1Q15327 319 aa15.87■□□□□ 0.13
TSPAN3-205ENST00000558745 TRIM60Q495X7 471 aa15.87■□□□□ 0.13
TSPAN3-205ENST00000558745 CHRDL2Q6WN34 429 aa15.87■□□□□ 0.13
TSPAN3-205ENST00000558745 PCSK9Q8NBP7 692 aaKnown RBP15.87■□□□□ 0.13
TSPAN3-205ENST00000558745 RASGRP4Q8TDF6 673 aa15.87■□□□□ 0.13
TSPAN3-205ENST00000558745 STARD7Q9NQZ5 370 aa15.87■□□□□ 0.13
TSPAN3-205ENST00000558745 COL6A3P12111 3177 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 FRMPD4Q14CM0 1322 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 MOXD2PA6NHM9 499 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 SPDYE3A6NKU9 549 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 MYL3P08590 195 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 RBM25P49756 843 aaKnown RBP15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 ARHGAP1Q07960 439 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 ST3GAL1Q11201 340 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 SEMA3FQ13275 785 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 PPP1R18Q6NYC8 613 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 AFG1LQ8WV93 481 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 GJB4Q9NTQ9 266 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 TELO2Q9Y4R8 837 aa15.86■□□□□ 0.13
TSPAN3-205ENST00000558745 KIAA1217Q5T5P2 1943 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 hCG_1984214I3L0E3 225 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 GH1P01241 217 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 CLK2P49760 499 aaKnown RBP15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 TLE2Q04725 743 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 PCNX4Q63HM2 1172 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 TRIM22Q8IYM9 498 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 ZNF713Q8N859 430 aaPredicted RBP15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 CYP2W1Q8TAV3 490 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 GLT1D1Q96MS3 346 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 ZMYND12Q9H0C1 365 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 NR2E3Q9Y5X4 410 aa15.85■□□□□ 0.13
TSPAN3-205ENST00000558745 GRIN2DO15399 1336 aa15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 NKRFO15226 690 aaKnown RBP eCLIP15.84■□□□□ 0.132e-6■□□□□ 8.4
TSPAN3-205ENST00000558745 PQBP1O60828 265 aaKnown RBP15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 FDPSP14324 419 aaKnown RBP15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 ITGB5P18084 799 aa15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 SNX17Q15036 470 aa15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 CPLX2Q6PUV4 134 aaKnown RBP15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 SH3RF1Q7Z6J0 888 aa15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 DHX37Q8IY37 1157 aaKnown RBP15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 INPP4AQ96PE3 977 aaPredicted RBP15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 UIMC1Q96RL1 719 aa15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 ANO3Q9BYT9 981 aa15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 C6orf50Q9HD87 102 aa15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 PKD2L1Q9P0L9 805 aa15.84■□□□□ 0.13
TSPAN3-205ENST00000558745 KCNJ14Q9UNX9 436 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms