RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PCNX4Q63HM2 1172 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 MCTP2Q6DN12 878 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 NOSTRINQ8IVI9 506 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 CYP2W1Q8TAV3 490 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
NEDD1-213ENST00000557644 KATNBL1Q9H079 304 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 EHMT1Q9H9B1 1298 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 RGS20O76081 388 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 INHAP05111 366 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
NEDD1-213ENST00000557644 CCND2P30279 289 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 SLC9C1Q4G0N8 1177 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 TRMT44Q8IYL2 757 aaKnown RBP17.43■□□□□ 0.38
NEDD1-213ENST00000557644 TRPV1Q8NER1 839 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 PDGFCQ9NRA1 345 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 WNT7AO00755 349 aa17.42■□□□□ 0.38
NEDD1-213ENST00000557644 MYCP01106 439 aaPredicted RBP17.42■□□□□ 0.38
NEDD1-213ENST00000557644 PKN2Q16513 984 aaKnown RBP17.42■□□□□ 0.38
NEDD1-213ENST00000557644 MPHOSPH6Q99547 160 aaKnown RBP17.42■□□□□ 0.38
NEDD1-213ENST00000557644 ZHX1Q9UKY1 873 aaPredicted RBP17.42■□□□□ 0.38
NEDD1-213ENST00000557644 CNPY2Q9Y2B0 182 aa17.42■□□□□ 0.38
NEDD1-213ENST00000557644 LOC102724159A0A0B4J2E5 919 aa17.42■□□□□ 0.38
NEDD1-213ENST00000557644 EIF3JO75822 258 aaKnown RBP17.42■□□□□ 0.38
NEDD1-213ENST00000557644 ITGB5P18084 799 aa17.42■□□□□ 0.38
NEDD1-213ENST00000557644 ACVR2BQ13705 512 aa17.42■□□□□ 0.38
NEDD1-213ENST00000557644 PWP2Q15269 919 aaKnown RBP17.42■□□□□ 0.38
NEDD1-213ENST00000557644 B4DLN1 442 aa17.41■□□□□ 0.38
NEDD1-213ENST00000557644 FAM86B1E9PN63 330 aa17.41■□□□□ 0.38
NEDD1-213ENST00000557644 FAM86B2P0C5J1 330 aa17.41■□□□□ 0.38
NEDD1-213ENST00000557644 ZNF865P0CJ78 1059 aaPredicted RBP17.41■□□□□ 0.38
NEDD1-213ENST00000557644 TMEM63BQ5T3F8 832 aa17.41■□□□□ 0.38
NEDD1-213ENST00000557644 SEPT14Q6ZU15 432 aa17.41■□□□□ 0.38
NEDD1-213ENST00000557644 MCOLN1Q9GZU1 580 aa17.41■□□□□ 0.38
NEDD1-213ENST00000557644 ABHD16BQ9H3Z7 469 aa17.41■□□□□ 0.38
NEDD1-213ENST00000557644 MYH7BA7E2Y1 1941 aa17.41■□□□□ 0.38
NEDD1-213ENST00000557644 CYP3A4P08684 503 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 CYBAP13498 195 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 ATP2B1P20020 1258 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 PTGS1P23219 599 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 CCND3P30281 292 aaPredicted RBP17.4■□□□□ 0.38
NEDD1-213ENST00000557644 LETM2Q2VYF4 491 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 MAP3K21Q5TCX8 1036 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 TAPT1Q6NXT6 567 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 WDR11Q9BZH6 1224 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 LRRC37A2A6NM11 1700 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 TDP2O95551 362 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 DDIT3P35638 169 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 NEK8Q86SG6 692 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 IPO9Q96P70 1041 aaKnown RBP17.4■□□□□ 0.38
NEDD1-213ENST00000557644 UIMC1Q96RL1 719 aa17.4■□□□□ 0.38
NEDD1-213ENST00000557644 ZNF76P36508 570 aa17.39■□□□□ 0.38
NEDD1-213ENST00000557644 NBR1Q14596 966 aa17.39■□□□□ 0.38
NEDD1-213ENST00000557644 XRRA1Q6P2D8 792 aa17.39■□□□□ 0.38
NEDD1-213ENST00000557644 FAM173BQ6P4H8 233 aa17.39■□□□□ 0.38
NEDD1-213ENST00000557644 INPP4AQ96PE3 977 aaPredicted RBP17.39■□□□□ 0.38
NEDD1-213ENST00000557644 VTA1Q9NP79 307 aa17.39■□□□□ 0.38
NEDD1-213ENST00000557644 ZDHHC9Q9Y397 364 aa17.39■□□□□ 0.38
NEDD1-213ENST00000557644 UBIAD1Q9Y5Z9 338 aa17.39■□□□□ 0.38
NEDD1-213ENST00000557644 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.39■□□□□ 0.37
NEDD1-213ENST00000557644 ADCY6O43306 1168 aa17.39■□□□□ 0.37
NEDD1-213ENST00000557644 ADCYAP1R1P41586 468 aa17.39■□□□□ 0.37
NEDD1-213ENST00000557644 USP11P51784 963 aa17.39■□□□□ 0.37
NEDD1-213ENST00000557644 RESTQ13127 1097 aa17.39■□□□□ 0.37
NEDD1-213ENST00000557644 MTFR1Q15390 333 aa17.39■□□□□ 0.37
NEDD1-213ENST00000557644 CCDC144BQ3MJ40 725 aa17.39■□□□□ 0.37
NEDD1-213ENST00000557644 CEP55Q53EZ4 464 aa17.39■□□□□ 0.37
NEDD1-213ENST00000557644 COL13A1Q5TAT6 717 aaPredicted RBP17.39■□□□□ 0.37
NEDD1-213ENST00000557644 ARIH2O95376 493 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 ZSCAN22P10073 491 aaPredicted RBP17.38■□□□□ 0.37
NEDD1-213ENST00000557644 CNGA1P29973 690 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 TOB1P50616 345 aaPredicted RBP17.38■□□□□ 0.37
NEDD1-213ENST00000557644 SEMA3FQ13275 785 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 PRR16Q569H4 304 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 LENG1Q96BZ8 264 aaPredicted RBP17.38■□□□□ 0.37
NEDD1-213ENST00000557644 MXRA8Q9BRK3 442 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 IGLV3-22A0A075B6J6 115 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 CCNT1O60563 726 aaKnown RBP17.38■□□□□ 0.37
NEDD1-213ENST00000557644 CIITAP33076 1130 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 GJC2Q5T442 439 aaPredicted RBP17.38■□□□□ 0.37
NEDD1-213ENST00000557644 ANO1Q5XXA6 986 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 LENG9Q96B70 501 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 JADE2Q9NQC1 790 aa17.38■□□□□ 0.37
NEDD1-213ENST00000557644 MEIS1O00470 390 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 SLC37A4O43826 429 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 STAM2O75886 525 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 ARP10275 920 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 SP2Q02086 613 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 MTMR1Q13613 665 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 LY6KQ17RY6 165 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 UNC93B1Q9H1C4 597 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 BCAS3Q9H6U6 928 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 KCNH7Q9NS40 1196 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 PKD2L1Q9P0L9 805 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 MRVI1Q9Y6F6 885 aa17.37■□□□□ 0.37
NEDD1-213ENST00000557644 BRD1O95696 1058 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 FOXD4L6Q3SYB3 417 aaPredicted RBP17.36■□□□□ 0.37
NEDD1-213ENST00000557644 GNPTABQ3T906 1256 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 FOXD4L3Q6VB84 417 aaPredicted RBP17.36■□□□□ 0.37
NEDD1-213ENST00000557644 PLA2G4DQ86XP0 818 aa17.36■□□□□ 0.37
NEDD1-213ENST00000557644 SCFD2Q8WU76 684 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms