RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-208ENST00000556067 MTMR4Q9NYA4 1195 aa6.4□□□□□ -1.38
ATL1-208ENST00000556067 GPRC5DQ9NZD1 345 aa6.4□□□□□ -1.38
ATL1-208ENST00000556067 SEC63Q9UGP8 760 aaKnown RBP6.4□□□□□ -1.38
ATL1-208ENST00000556067 ZDHHC9Q9Y397 364 aa6.4□□□□□ -1.38
ATL1-208ENST00000556067 NAV1Q8NEY1 1877 aa6.4□□□□□ -1.39
ATL1-208ENST00000556067 NID2Q14112 1375 aa6.4□□□□□ -1.39
ATL1-208ENST00000556067 CHD4Q14839 1912 aa6.4□□□□□ -1.39
ATL1-208ENST00000556067 ATRNL1Q5VV63 1379 aa6.4□□□□□ -1.39
ATL1-208ENST00000556067 KLRF2D3W0D1 207 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 EML1O00423 815 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 KHNYNO15037 678 aaKnown RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 ATXN7O15265 892 aaPredicted RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 PRPF40AO75400 957 aaKnown RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 MBD3O95983 291 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 SMARCA1P28370 1054 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 GUCY1B3Q02153 619 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 ICA1Q05084 483 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 RASA3Q14644 834 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 SF3A1Q15459 793 aaKnown RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 CCDC96Q2M329 555 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 SUPT20HL1Q3ZLR7 823 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 ASPRV1Q53RT3 343 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 GPATCH4Q5T3I0 446 aaKnown RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 RCSD1Q6JBY9 416 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 FIGNL1Q6PIW4 674 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 LRRC69Q6ZNQ3 347 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 CDC37L1Q7L3B6 337 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 FBXO18Q8NFZ0 1043 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 SYAP1Q96A49 352 aaPredicted RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 DCPSQ96C86 337 aaKnown RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 RRP36Q96EU6 259 aaKnown RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 ZBED3Q96IU2 234 aaPredicted RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 PHACTR1Q9C0D0 580 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 TMEM39BQ9GZU3 492 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 ADARB2Q9NS39 739 aaKnown RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 GINM1Q9NU53 330 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 NYAP2Q9P242 653 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 STK17AQ9UEE5 414 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 HACL1Q9UJ83 578 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 PPP2R3BQ9Y5P8 575 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 DDX49Q9Y6V7 483 aaKnown RBP6.39□□□□□ -1.39
ATL1-208ENST00000556067 ZNF541Q9H0D2 1346 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 PLIN4Q96Q06 1357 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 LAMB1P07942 1786 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 FER1L6Q2WGJ9 1857 aa6.39□□□□□ -1.39
ATL1-208ENST00000556067 BAZ2AQ9UIF9 1905 aaKnown RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 FAM181BA6NEQ2 426 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 FIBPO43427 364 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 BNIP3LO60238 219 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 DTNBO60941 627 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 GDF11O95390 407 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 PLEKHA8P1O95397 391 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 GH2P01242 217 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 ASNSP08243 561 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 FDPSP14324 419 aaKnown RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 FGFR3P22607 806 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 CALML3P27482 149 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 SLC1A4P43007 532 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 NLRP5P59047 1200 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 SRSF11Q05519 484 aaKnown RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 TRAF1Q13077 416 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 IKQ13123 557 aaPredicted RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 SEPT2Q15019 361 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 NTRK3Q16288 839 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 ANGEL2Q5VTE6 544 aaKnown RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 KRT40Q6A162 431 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 USP48Q86UV5 1035 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 NLRP8Q86W28 1048 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 METTL16Q86W50 562 aaKnown RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 FAM177A1Q8N128 213 aaPredicted RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 CMTR1Q8N1G2 835 aaKnown RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 LRRC47Q8N1G4 583 aaKnown RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 CCDC148Q8NFR7 591 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 WHAMMQ8TF30 809 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 STK32AQ8WU08 396 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 DCAF4Q8WV16 495 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 MKL1Q969V6 931 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 SPATA32Q96LK8 384 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 ZNF341Q9BYN7 854 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 DEFB129Q9H1M3 183 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 SYNPO2Q9UMS6 1093 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 NOL7Q9UMY1 257 aaKnown RBP6.38□□□□□ -1.39
ATL1-208ENST00000556067 PCDHGC4Q9Y5F7 938 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 SCN9AQ15858 1988 aa6.38□□□□□ -1.39
ATL1-208ENST00000556067 MYH1P12882 1939 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 ARFGEF1Q9Y6D6 1849 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 COL4A5P29400 1685 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 CNTNAP1P78357 1384 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 IGKV6D-41A0A0C4DH26 115 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 IQCA1LA6NCM1 817 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 hCG_1984214I3L0E3 225 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 PRMT3O60678 531 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 DDNO94850 711 aaPredicted RBP6.37□□□□□ -1.39
ATL1-208ENST00000556067 GOLGA8HP0CJ92 632 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 BMP4P12644 408 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 SCG2P13521 617 aa6.37□□□□□ -1.39
ATL1-208ENST00000556067 EEF2P13639 858 aaKnown RBP6.37□□□□□ -1.39
ATL1-208ENST00000556067 YBX3P16989 372 aaKnown RBP eCLIP6.37□□□□□ -1.39
ATL1-208ENST00000556067 NF2P35240 595 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms