RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 BAIAP3O94812 1187 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 CFBP00751 764 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 MMP3P08254 477 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 CYP2C9P11712 490 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 GSPT1P15170 499 aaKnown RBP9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 GRM4Q14833 912 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 SEPT14Q6ZU15 432 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 CYB5R4Q7L1T6 521 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 RALYLQ86SE5 291 aaKnown RBP9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 PPTC7Q8NI37 304 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 AFAP1L1Q8TED9 768 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 AFG1LQ8WV93 481 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 ATXN2LQ8WWM7 1075 aaKnown RBP9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 COPS5Q92905 334 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 YTHDC1Q96MU7 727 aaKnown RBP9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 SLC9A7Q96T83 725 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 PDCD2LQ9BRP1 358 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 CPVLQ9H3G5 476 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 COL20A1Q9P218 1284 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 UNC80Q8N2C7 3258 aa9.04□□□□□ -0.96
PTCSC3-201ENST00000556013 E7EWF7 191 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 GCOM1H8Y6P7 765 aaPredicted RBP9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 HAS3O00219 553 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 OPLAHO14841 1288 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 EFCAB14O75071 495 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 POLR2MP0CAP2 368 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 ATP2A2P16615 1042 aaKnown RBP9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 PTGS1P23219 599 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 ICAM3P32942 547 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 PBX2P40425 430 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 GNAQP50148 359 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 WTAPQ15007 396 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 PTGISQ16647 500 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 LY6KQ17RY6 165 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 FAM47CQ5HY64 1035 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 TMEM67Q5HYA8 995 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 MYSM1Q5VVJ2 828 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 TEX2Q8IWB9 1127 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 DHX37Q8IY37 1157 aaKnown RBP9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 IGDCC4Q8TDY8 1250 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 KAT2BQ92831 832 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 SCLYQ96I15 445 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 LZTS2Q9BRK4 669 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 IL25Q9H293 177 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 GTF2IRD1Q9UHL9 959 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 NOD1Q9Y239 953 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 MRVI1Q9Y6F6 885 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 LCTP09848 1927 aa9.03□□□□□ -0.96
PTCSC3-201ENST00000556013 F2P00734 622 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 CXCL10P02778 98 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 SELPP16109 830 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 EIF2AK2P19525 551 aaKnown RBP9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 KIF5BP33176 963 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 PTH1RQ03431 593 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 PTK7Q13308 1070 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 PGM5Q15124 567 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 GNPTABQ3T906 1256 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 TJAP1Q5JTD0 557 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 CELF3Q5SZQ8 465 aaKnown RBP9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 XRRA1Q6P2D8 792 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 CATIPQ7Z7H3 387 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 TMEM87BQ96K49 555 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 SENP7Q9BQF6 1050 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 LRRC37A2A6NM11 1700 aa9.02□□□□□ -0.97
PTCSC3-201ENST00000556013 ABHD14A-ACY1A0A1B0GW23 586 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 PIK3CDO00329 1044 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 MAFGO15525 162 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 CYTH3O43739 400 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 PPP1R11O60927 126 aaPredicted RBP9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 RGS20O76081 388 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 DDAH1O94760 285 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 CCND2P30279 289 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 LIFRP42702 1097 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 PSEN2P49810 448 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 NEDD9Q14511 834 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 GDF6Q6KF10 455 aaPredicted RBP9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 MB21D2Q8IYB1 491 aaPredicted RBP9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 C7orf31Q8N865 590 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 CTAGE1Q96RT6 745 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 PIGSQ96S52 555 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 SPZ1Q9BXG8 430 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 USP26Q9BXU7 913 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 TSPYL2Q9H2G4 693 aaPredicted RBP9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 NKX2-4Q9H2Z4 354 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 PRDM12Q9H4Q4 367 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 MLXIPQ9HAP2 919 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 HDAC6Q9UBN7 1215 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 YBX2Q9Y2T7 364 aaKnown RBP9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 VCANP13611 3396 aa9.01□□□□□ -0.97
PTCSC3-201ENST00000556013 PRUNE2Q8WUY3 3088 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 SPATA31C2B4DYI2 1134 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 CAND2O75155 1236 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 CALM1P0DP23 149 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 CALM2P0DP24 149 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 CALM3P0DP25 149 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 CKBP12277 381 aa9□□□□□ -0.97
PTCSC3-201ENST00000556013 MYCLP12524 364 aaPredicted RBP9□□□□□ -0.97
PTCSC3-201ENST00000556013 MCM5P33992 734 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms