RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 DDX41Q9UJV9 622 aaKnown RBP20.63■□□□□ 0.89
NPC2-208ENST00000556009 KLRF2D3W0D1 207 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 NR3C2P08235 984 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 RABGGTBP53611 331 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 ARHGEF16Q5VV41 709 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 STAG2Q8N3U4 1231 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 PHOSPHO2Q8TCD6 241 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 ATXN2LQ8WWM7 1075 aaKnown RBP20.62■□□□□ 0.89
NPC2-208ENST00000556009 KAT2BQ92831 832 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 PXMP2Q9NR77 195 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 NOD1Q9Y239 953 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 TRANK1O15050 2925 aa20.62■□□□□ 0.89
NPC2-208ENST00000556009 PALM3A6NDB9 673 aaPredicted RBP20.61■□□□□ 0.89
NPC2-208ENST00000556009 OPLAHO14841 1288 aa20.61■□□□□ 0.89
NPC2-208ENST00000556009 PTGISQ16647 500 aa20.61■□□□□ 0.89
NPC2-208ENST00000556009 PPM1EQ8WY54 764 aa20.61■□□□□ 0.89
NPC2-208ENST00000556009 MAD2L2Q9UI95 211 aa20.61■□□□□ 0.89
NPC2-208ENST00000556009 ZBTB5O15062 677 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 CFBP00751 764 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 MYOGP15173 224 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 EIF2AK2P19525 551 aaKnown RBP20.6■□□□□ 0.89
NPC2-208ENST00000556009 PDE4AP27815 886 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 TRDNQ13061 729 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 TRAF1Q13077 416 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 LAMC2Q13753 1193 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 DGKDQ16760 1214 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 TTC22Q5TAA0 569 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 PPP2R2DQ66LE6 453 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 STOX1Q6ZVD7 989 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 CYB5R4Q7L1T6 521 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 CCDC155Q8N6L0 562 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 CAGE1Q8TC20 777 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 CTAGE1Q96RT6 745 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 SLC9A7Q96T83 725 aa20.6■□□□□ 0.89
NPC2-208ENST00000556009 TCF20Q9UGU0 1960 aaKnown RBP20.59■□□□□ 0.89
NPC2-208ENST00000556009 COL4A4P53420 1690 aaPredicted RBP20.59■□□□□ 0.89
NPC2-208ENST00000556009 PPP1R11O60927 126 aaPredicted RBP20.59■□□□□ 0.89
NPC2-208ENST00000556009 GSPT1P15170 499 aaKnown RBP20.59■□□□□ 0.89
NPC2-208ENST00000556009 IGFBP4P22692 258 aa20.59■□□□□ 0.89
NPC2-208ENST00000556009 RBL2Q08999 1139 aa20.59■□□□□ 0.89
NPC2-208ENST00000556009 TMEM67Q5HYA8 995 aa20.59■□□□□ 0.89
NPC2-208ENST00000556009 GDF6Q6KF10 455 aaPredicted RBP20.59■□□□□ 0.89
NPC2-208ENST00000556009 KCNV1Q6PIU1 500 aa20.59■□□□□ 0.89
NPC2-208ENST00000556009 AFAP1L1Q8TED9 768 aa20.59■□□□□ 0.89
NPC2-208ENST00000556009 RUFY2Q8WXA3 655 aa20.59■□□□□ 0.89
NPC2-208ENST00000556009 PDCD2LQ9BRP1 358 aa20.59■□□□□ 0.89
NPC2-208ENST00000556009 PCDHA1Q9Y5I3 950 aa20.59■□□□□ 0.89
NPC2-208ENST00000556009 U3KPZ7 1027 aaPredicted RBP20.59■□□□□ 0.89
NPC2-208ENST00000556009 NCOR1O75376 2440 aa20.59■□□□□ 0.89
NPC2-208ENST00000556009 BAZ2BQ9UIF8 2168 aaKnown RBP20.58■□□□□ 0.89
NPC2-208ENST00000556009 BAIAP3O94812 1187 aa20.58■□□□□ 0.89
NPC2-208ENST00000556009 PARNO95453 639 aaKnown RBP20.58■□□□□ 0.89
NPC2-208ENST00000556009 POU3F3P20264 500 aaPredicted RBP20.58■□□□□ 0.89
NPC2-208ENST00000556009 CHST3Q7LGC8 479 aa20.58■□□□□ 0.89
NPC2-208ENST00000556009 VSIG10LQ86VR7 867 aa20.58■□□□□ 0.89
NPC2-208ENST00000556009 PPTC7Q8NI37 304 aa20.58■□□□□ 0.89
NPC2-208ENST00000556009 FTOQ9C0B1 505 aaKnown RBP eCLIP20.58■□□□□ 0.89
NPC2-208ENST00000556009 RIOX1Q9H6W3 641 aa20.58■□□□□ 0.89
NPC2-208ENST00000556009 GTF2IRD1Q9UHL9 959 aa20.58■□□□□ 0.89
NPC2-208ENST00000556009 MRVI1Q9Y6F6 885 aa20.58■□□□□ 0.89
NPC2-208ENST00000556009 RGS20O76081 388 aa20.57■□□□□ 0.88
NPC2-208ENST00000556009 CYP21A2P08686 494 aa20.57■□□□□ 0.88
NPC2-208ENST00000556009 HOXD8P13378 290 aaPredicted RBP20.57■□□□□ 0.88
NPC2-208ENST00000556009 CHMP4BP1P59074 171 aa20.57■□□□□ 0.88
NPC2-208ENST00000556009 GRM4Q14833 912 aa20.57■□□□□ 0.88
NPC2-208ENST00000556009 DHX37Q8IY37 1157 aaKnown RBP20.57■□□□□ 0.88
NPC2-208ENST00000556009 ASB2Q96Q27 587 aa20.57■□□□□ 0.88
NPC2-208ENST00000556009 KATNAL1Q9BW62 490 aa20.57■□□□□ 0.88
NPC2-208ENST00000556009 DOCK5Q9H7D0 1870 aa20.57■□□□□ 0.88
NPC2-208ENST00000556009 THEGQ9P2T0 379 aa20.57■□□□□ 0.88
NPC2-208ENST00000556009 PRRC2BQ5JSZ5 2229 aaKnown RBP20.56■□□□□ 0.88
NPC2-208ENST00000556009 RBAK-RBAKDNI3L0D1 243 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 HAS3O00219 553 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 PPFIA4O75335 1185 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 F2P00734 622 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 TGFB3P10600 412 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 SELPP16109 830 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 CHMLP26374 656 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 GPNMBQ14956 572 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 CCDC85BQ15834 202 aaPredicted RBP20.56■□□□□ 0.88
NPC2-208ENST00000556009 SLC35G1Q2M3R5 365 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 C7orf31Q8N865 590 aa20.56■□□□□ 0.88
NPC2-208ENST00000556009 DHX38Q92620 1227 aaKnown RBP20.56■□□□□ 0.88
NPC2-208ENST00000556009 IFIT3O14879 490 aaKnown RBP20.55■□□□□ 0.88
NPC2-208ENST00000556009 CA3P07451 260 aa20.55■□□□□ 0.88
NPC2-208ENST00000556009 PSEN2P49810 448 aa20.55■□□□□ 0.88
NPC2-208ENST00000556009 MRPS5P82675 430 aaKnown RBP20.55■□□□□ 0.88
NPC2-208ENST00000556009 PTH1RQ03431 593 aa20.55■□□□□ 0.88
NPC2-208ENST00000556009 MYSM1Q5VVJ2 828 aa20.55■□□□□ 0.88
NPC2-208ENST00000556009 HERC6Q8IVU3 1022 aa20.55■□□□□ 0.88
NPC2-208ENST00000556009 HDAC6Q9UBN7 1215 aa20.55■□□□□ 0.88
NPC2-208ENST00000556009 BDP1A6H8Y1 2624 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 PNMA6FA0A0J9YX94 578 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 ERICH2A1L162 156 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 KIF28PB7ZC32 967 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 CXCL10P02778 98 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 MYCLP12524 364 aaPredicted RBP20.54■□□□□ 0.88
NPC2-208ENST00000556009 TROAPQ12815 778 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 PTK7Q13308 1070 aa20.54■□□□□ 0.88
NPC2-208ENST00000556009 MFSD10Q14728 455 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms