RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 IFT88Q13099 833 aa19.63■□□□□ 0.73
RCCD1-204ENST00000555737 ITPK1Q13572 414 aa19.63■□□□□ 0.73
RCCD1-204ENST00000555737 NONOQ15233 471 aaKnown RBP eCLIP19.63■□□□□ 0.73
RCCD1-204ENST00000555737 FAM133AQ8N9E0 248 aa19.63■□□□□ 0.73
RCCD1-204ENST00000555737 MTA3Q9BTC8 594 aa19.63■□□□□ 0.73
RCCD1-204ENST00000555737 PLAGL2Q9UPG8 496 aa19.63■□□□□ 0.73
RCCD1-204ENST00000555737 KIAA0753Q2KHM9 967 aa19.63■□□□□ 0.73
RCCD1-204ENST00000555737 CNNM4Q6P4Q7 775 aa19.63■□□□□ 0.73
RCCD1-204ENST00000555737 FNBP4Q8N3X1 1017 aaPredicted RBP19.63■□□□□ 0.73
RCCD1-204ENST00000555737 TMEM47Q9BQJ4 181 aa19.63■□□□□ 0.73
RCCD1-204ENST00000555737 LSM14BQ9BX40 385 aaKnown RBP19.63■□□□□ 0.73
RCCD1-204ENST00000555737 CAMTA2O94983 1202 aa19.62■□□□□ 0.73
RCCD1-204ENST00000555737 SNX29Q8TEQ0 813 aa19.62■□□□□ 0.73
RCCD1-204ENST00000555737 ANKIB1Q9P2G1 1089 aa19.62■□□□□ 0.73
RCCD1-204ENST00000555737 LRP6O75581 1613 aa19.62■□□□□ 0.73
RCCD1-204ENST00000555737 STXBP3O00186 592 aa19.62■□□□□ 0.73
RCCD1-204ENST00000555737 TCP1P17987 556 aaKnown RBP19.62■□□□□ 0.73
RCCD1-204ENST00000555737 GRIK5Q16478 980 aa19.62■□□□□ 0.73
RCCD1-204ENST00000555737 SEC63Q9UGP8 760 aaKnown RBP19.62■□□□□ 0.73
RCCD1-204ENST00000555737 GRIN2DO15399 1336 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 GOLGA8KD6RF30 607 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 KCNK3O14649 394 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 KLRC1P26715 233 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 AMPD3Q01432 767 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 CFAP221Q4G0U5 840 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 NAA35Q5VZE5 725 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 LOC102724428A0A0B4J2F2 783 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 NPHP3-ACAD11A0A0J9YXS1 232 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 HNRNPH1P31943 449 aaKnown RBP19.61■□□□□ 0.73
RCCD1-204ENST00000555737 SIK1P57059 783 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 KLHDC7AQ5VTJ3 777 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 KCNK18Q7Z418 384 aa19.61■□□□□ 0.73
RCCD1-204ENST00000555737 MMS22LQ6ZRQ5 1243 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 NEK8Q86SG6 692 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 MMGT1Q8N4V1 131 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 GPCPD1Q9NPB8 672 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 SMIM23A6NLE4 172 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 UBE2SQ16763 222 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 SPTY2D1Q68D10 685 aaPredicted RBP19.6■□□□□ 0.73
RCCD1-204ENST00000555737 TMED8Q6PL24 325 aaPredicted RBP19.6■□□□□ 0.73
RCCD1-204ENST00000555737 MSL3Q8N5Y2 521 aaKnown RBP19.6■□□□□ 0.73
RCCD1-204ENST00000555737 JPH2Q9BR39 696 aaPredicted RBP19.6■□□□□ 0.73
RCCD1-204ENST00000555737 CCSER1Q9C0I3 900 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 KCNQ2O43526 872 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 CEP104O60308 925 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 CALCRLQ16602 461 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 IFT20Q8IY31 132 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 RETREG2Q8NC44 543 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 DDX12PQ92771 950 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 FGFBP2Q9BYJ0 223 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 BARHL2Q9NY43 387 aa19.6■□□□□ 0.73
RCCD1-204ENST00000555737 ZNF233A6NK53 670 aa19.59■□□□□ 0.73
RCCD1-204ENST00000555737 UBE4AQ14139 1066 aa19.59■□□□□ 0.73
RCCD1-204ENST00000555737 ARPP21Q9UBL0 812 aaPredicted RBP19.59■□□□□ 0.73
RCCD1-204ENST00000555737 SLC37A4O43826 429 aa19.59■□□□□ 0.73
RCCD1-204ENST00000555737 ACTN1P12814 892 aa19.59■□□□□ 0.73
RCCD1-204ENST00000555737 HDLBPQ00341 1268 aaKnown RBP19.59■□□□□ 0.73
RCCD1-204ENST00000555737 LARP4BQ92615 738 aaKnown RBP19.59■□□□□ 0.73
RCCD1-204ENST00000555737 MMTAG2Q9BU76 263 aaKnown RBP19.59■□□□□ 0.73
RCCD1-204ENST00000555737 FLT1P17948 1338 aa19.59■□□□□ 0.73
RCCD1-204ENST00000555737 COL18A1P39060 1754 aa19.59■□□□□ 0.73
RCCD1-204ENST00000555737 ORC4O43929 436 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 KRT18P05783 430 aaKnown RBP19.58■□□□□ 0.73
RCCD1-204ENST00000555737 TMOD1P28289 359 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 MAN2A1Q16706 1144 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 TCERG1LQ5VWI1 586 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 LRRC47Q8N1G4 583 aaKnown RBP19.58■□□□□ 0.73
RCCD1-204ENST00000555737 UBLCP1Q8WVY7 318 aaPredicted RBP19.58■□□□□ 0.73
RCCD1-204ENST00000555737 CASKIN2Q8WXE0 1202 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 ERGIC2Q96RQ1 377 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 C6orf50Q9HD87 102 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 PLAAQ9Y263 795 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 SIK3Q9Y2K2 1263 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 CHD4Q14839 1912 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 NR1D1P20393 614 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 PARP10Q53GL7 1025 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 ATP8A2Q9NTI2 1148 aa19.58■□□□□ 0.73
RCCD1-204ENST00000555737 ALS2Q96Q42 1657 aa19.58■□□□□ 0.72
RCCD1-204ENST00000555737 LMTK3Q96Q04 1460 aa19.58■□□□□ 0.72
RCCD1-204ENST00000555737 GUCY2CP25092 1073 aa19.58■□□□□ 0.72
RCCD1-204ENST00000555737 PRPF4BQ13523 1007 aaKnown RBP19.58■□□□□ 0.72
RCCD1-204ENST00000555737 SLC9C1Q4G0N8 1177 aa19.58■□□□□ 0.72
RCCD1-204ENST00000555737 SFMBT2Q5VUG0 894 aa19.58■□□□□ 0.72
RCCD1-204ENST00000555737 REXO1Q8N1G1 1221 aaKnown RBP19.58■□□□□ 0.72
RCCD1-204ENST00000555737 TAF4BQ92750 862 aa19.58■□□□□ 0.72
RCCD1-204ENST00000555737 CD248Q9HCU0 757 aa19.58■□□□□ 0.72
RCCD1-204ENST00000555737 A0A087X0T9 212 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 FAM228BP0C875 321 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 LSP1P33241 339 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 RPS8P62241 208 aaKnown RBP19.57■□□□□ 0.72
RCCD1-204ENST00000555737 KLHL30Q0D2K2 578 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 SRP68Q9UHB9 627 aaKnown RBP19.57■□□□□ 0.72
RCCD1-204ENST00000555737 GOLGA6L10A6NI86 522 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 RAD51CO43502 376 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 GRB10Q13322 594 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 PICALMQ13492 652 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 FAM83BQ5T0W9 1011 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 PURBQ96QR8 312 aaKnown RBP19.57■□□□□ 0.72
RCCD1-204ENST00000555737 DPH5Q9H2P9 285 aa19.57■□□□□ 0.72
RCCD1-204ENST00000555737 SLIT2O94813 1529 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms