RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 A0A1B0GVL5 298 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 KIF28PB7ZC32 967 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 ZNF202O95125 648 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 PTGS1P23219 599 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 PTPREP23469 700 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 MORN1Q5T089 497 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 OTOP1Q7RTM1 612 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 CHST13Q8NET6 341 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 TBC1D5Q92609 795 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 USP6NLQ92738 828 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 ACAD9Q9H845 621 aa19.69■□□□□ 0.74
SHOX-204ENST00000554971 A1CFQ9NQ94 594 aaKnown RBP19.69■□□□□ 0.74
SHOX-204ENST00000554971 PRKCZQ05513 592 aa19.68■□□□□ 0.74
SHOX-204ENST00000554971 KIF22Q14807 665 aa19.68■□□□□ 0.74
SHOX-204ENST00000554971 PFKFB3Q16875 520 aaPredicted RBP19.68■□□□□ 0.74
SHOX-204ENST00000554971 DHX40Q8IX18 779 aaKnown RBP19.68■□□□□ 0.74
SHOX-204ENST00000554971 TRIM22Q8IYM9 498 aa19.68■□□□□ 0.74
SHOX-204ENST00000554971 AIFM3Q96NN9 605 aa19.68■□□□□ 0.74
SHOX-204ENST00000554971 ADORA2AP29274 412 aa19.68■□□□□ 0.74
SHOX-204ENST00000554971 COPB2P35606 906 aa19.68■□□□□ 0.74
SHOX-204ENST00000554971 TPM4P67936 248 aa19.68■□□□□ 0.74
SHOX-204ENST00000554971 GNL2Q13823 731 aaKnown RBP19.68■□□□□ 0.74
SHOX-204ENST00000554971 SAFBQ15424 915 aaKnown RBP eCLIP19.68■□□□□ 0.74
SHOX-204ENST00000554971 TKFCQ3LXA3 575 aa19.68■□□□□ 0.74
SHOX-204ENST00000554971 PYCARDQ9ULZ3 195 aa19.68■□□□□ 0.74
SHOX-204ENST00000554971 ABCB11O95342 1321 aa19.67■□□□□ 0.74
SHOX-204ENST00000554971 SMTNL1A8MU46 457 aa19.67■□□□□ 0.74
SHOX-204ENST00000554971 PGK2P07205 417 aa19.67■□□□□ 0.74
SHOX-204ENST00000554971 SCG2P13521 617 aa19.67■□□□□ 0.74
SHOX-204ENST00000554971 HEATR3Q7Z4Q2 680 aa19.67■□□□□ 0.74
SHOX-204ENST00000554971 HPSEQ9Y251 543 aa19.67■□□□□ 0.74
SHOX-204ENST00000554971 TRIM17Q9Y577 477 aa19.67■□□□□ 0.74
SHOX-204ENST00000554971 STXBP3O00186 592 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 STRNO43815 780 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 CUTAO60888 179 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 COBLO75128 1261 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 FCER1AP12319 257 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 FLT3LGP49771 235 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 NLRP12P59046 1061 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 PTPAQ15257 358 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 ABRAQ8N0Z2 381 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 BARHL2Q9NY43 387 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 CYP39A1Q9NYL5 469 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 IMPACTQ9P2X3 320 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 SRRDQ9UH36 339 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 FBXO40Q9UH90 709 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 PNMA2Q9UL42 364 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 MORC2Q9Y6X9 1032 aaPredicted RBP19.66■□□□□ 0.74
SHOX-204ENST00000554971 DNAJC25-GNG10A0A024R161 153 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 PURBQ96QR8 312 aaKnown RBP19.66■□□□□ 0.74
SHOX-204ENST00000554971 MMP19Q99542 508 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 FOXP1Q9H334 677 aaPredicted RBP19.66■□□□□ 0.74
SHOX-204ENST00000554971 PRDM10Q9NQV6 1147 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 IVNS1ABPQ9Y6Y0 642 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 ASTN1O14525 1302 aa19.66■□□□□ 0.74
SHOX-204ENST00000554971 SLC15A5A6NIM6 579 aa19.65■□□□□ 0.74
SHOX-204ENST00000554971 PFKFB1P16118 471 aa19.65■□□□□ 0.74
SHOX-204ENST00000554971 GSDMDP57764 484 aa19.65■□□□□ 0.74
SHOX-204ENST00000554971 NSMFQ6X4W1 530 aa19.65■□□□□ 0.74
SHOX-204ENST00000554971 SLC30A10Q6XR72 485 aa19.65■□□□□ 0.74
SHOX-204ENST00000554971 ANKRD35Q8N283 1001 aa19.65■□□□□ 0.74
SHOX-204ENST00000554971 FGD4Q96M96 766 aa19.65■□□□□ 0.74
SHOX-204ENST00000554971 MRPL11Q9Y3B7 192 aaKnown RBP19.65■□□□□ 0.74
SHOX-204ENST00000554971 ADAMTS3O15072 1205 aa19.64■□□□□ 0.74
SHOX-204ENST00000554971 DEXIO95424 95 aa19.64■□□□□ 0.74
SHOX-204ENST00000554971 GNRH1P01148 92 aa19.64■□□□□ 0.74
SHOX-204ENST00000554971 SYKP43405 635 aa19.64■□□□□ 0.74
SHOX-204ENST00000554971 RPS6P62753 249 aaKnown RBP19.64■□□□□ 0.74
SHOX-204ENST00000554971 GHRHRQ02643 423 aa19.64■□□□□ 0.74
SHOX-204ENST00000554971 KCTD2Q14681 263 aa19.64■□□□□ 0.74
SHOX-204ENST00000554971 GJB4Q9NTQ9 266 aa19.64■□□□□ 0.74
SHOX-204ENST00000554971 COL20A1Q9P218 1284 aa19.64■□□□□ 0.74
SHOX-204ENST00000554971 IKBKBO14920 756 aa19.64■□□□□ 0.73
SHOX-204ENST00000554971 CNTN2Q02246 1040 aa19.64■□□□□ 0.73
SHOX-204ENST00000554971 MAP2K5Q13163 448 aa19.64■□□□□ 0.73
SHOX-204ENST00000554971 BAATQ14032 418 aaPredicted RBP19.64■□□□□ 0.73
SHOX-204ENST00000554971 SOCS4Q8WXH5 440 aa19.64■□□□□ 0.73
SHOX-204ENST00000554971 NUDT12Q9BQG2 462 aa19.64■□□□□ 0.73
SHOX-204ENST00000554971 TUBE1Q9UJT0 475 aa19.64■□□□□ 0.73
SHOX-204ENST00000554971 KIAA0100Q14667 2235 aaKnown RBP19.64■□□□□ 0.73
SHOX-204ENST00000554971 HOXC6P09630 235 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 AKAP17AQ02040 695 aaKnown RBP19.63■□□□□ 0.73
SHOX-204ENST00000554971 RILPL1Q5EBL4 403 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 RESP18Q5W5W9 173 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 NOSTRINQ8IVI9 506 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 FAM133AQ8N9E0 248 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 NPLOC4Q8TAT6 608 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 VPS54Q9P1Q0 977 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 HOOK1Q9UJC3 728 aaKnown RBP19.63■□□□□ 0.73
SHOX-204ENST00000554971 MEIS2O14770 477 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 MMP1P03956 469 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 CYP2B6P20813 491 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 HOXA13P31271 388 aaPredicted RBP19.63■□□□□ 0.73
SHOX-204ENST00000554971 HSD17B4P51659 736 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 CCL14Q16627 93 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 ZNF792Q3KQV3 632 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 RNF207Q6ZRF8 634 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 CTU1Q7Z7A3 348 aaKnown RBP19.63■□□□□ 0.73
SHOX-204ENST00000554971 LRRC8AQ8IWT6 810 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 KCND1Q9NSA2 647 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms