RNA–Protein interactions for RNA: ENST00000554338.1

RIPK3-202, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 5

Gene RIPK3, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-202ENST00000554338 PTPN11Q06124 597 aaPredicted RBP15.93■□□□□ 0.14
RIPK3-202ENST00000554338 DEFB128Q7Z7B8 93 aa15.93■□□□□ 0.14
RIPK3-202ENST00000554338 RPUSD2Q8IZ73 545 aaKnown RBP15.93■□□□□ 0.14
RIPK3-202ENST00000554338 IL31RAQ8NI17 732 aa15.93■□□□□ 0.14
RIPK3-202ENST00000554338 CTAGE1Q96RT6 745 aa15.93■□□□□ 0.14
RIPK3-202ENST00000554338 PIGSQ96S52 555 aa15.93■□□□□ 0.14
RIPK3-202ENST00000554338 PRDM12Q9H4Q4 367 aa15.93■□□□□ 0.14
RIPK3-202ENST00000554338 MSRAQ9UJ68 235 aa15.93■□□□□ 0.14
RIPK3-202ENST00000554338 DDX41Q9UJV9 622 aaKnown RBP15.93■□□□□ 0.14
RIPK3-202ENST00000554338 PCDHA1Q9Y5I3 950 aa15.93■□□□□ 0.14
RIPK3-202ENST00000554338 REV3LO60673 3130 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 ZBBXA8MT70 800 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 PITPNM1O00562 1244 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 CYTH3O43739 400 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
RIPK3-202ENST00000554338 RGS20O76081 388 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 PFKMP08237 780 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 HOXA13P31271 388 aaPredicted RBP15.92■□□□□ 0.14
RIPK3-202ENST00000554338 TROAPQ12815 778 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 WTAPQ15007 396 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 RALYLQ86SE5 291 aaKnown RBP15.92■□□□□ 0.14
RIPK3-202ENST00000554338 MB21D2Q8IYB1 491 aaPredicted RBP15.92■□□□□ 0.14
RIPK3-202ENST00000554338 PDCD2LQ9BRP1 358 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 RIOX1Q9H6W3 641 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 MRVI1Q9Y6F6 885 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 SLC4A7Q9Y6M7 1214 aa15.92■□□□□ 0.14
RIPK3-202ENST00000554338 MYOGP15173 224 aa15.91■□□□□ 0.14
RIPK3-202ENST00000554338 ADGRE1Q14246 886 aa15.91■□□□□ 0.14
RIPK3-202ENST00000554338 GDF6Q6KF10 455 aaPredicted RBP15.91■□□□□ 0.14
RIPK3-202ENST00000554338 NCOA7Q8NI08 942 aa15.91■□□□□ 0.14
RIPK3-202ENST00000554338 EMID1Q96A84 441 aaPredicted RBP15.91■□□□□ 0.14
RIPK3-202ENST00000554338 RBM8AQ9Y5S9 174 aaKnown RBP15.91■□□□□ 0.14
RIPK3-202ENST00000554338 BAZ2BQ9UIF8 2168 aaKnown RBP15.91■□□□□ 0.14
RIPK3-202ENST00000554338 ERICH2A1L162 156 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 IQCF3P0C7M6 154 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 ZNF286BP0CG31 522 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 MYCLP12524 364 aaPredicted RBP15.9■□□□□ 0.14
RIPK3-202ENST00000554338 ATP2A2P16615 1042 aaKnown RBP15.9■□□□□ 0.14
RIPK3-202ENST00000554338 RFC2P35250 354 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 PGM5Q15124 567 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 PTGISQ16647 500 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 TMEM67Q5HYA8 995 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 SESTD1Q86VW0 696 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 DHX38Q92620 1227 aaKnown RBP15.9■□□□□ 0.14
RIPK3-202ENST00000554338 MAP4K1Q92918 833 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 GAS2L1Q99501 681 aaPredicted RBP15.9■□□□□ 0.14
RIPK3-202ENST00000554338 NOD1Q9Y239 953 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 MYO9BQ13459 2157 aa15.9■□□□□ 0.14
RIPK3-202ENST00000554338 TET1Q8NFU7 2136 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 TRANK1O15050 2925 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 MUC3AQ02505 3323 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 RBAK-RBAKDNI3L0D1 243 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 SORBS3O60504 671 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 F2P00734 622 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 HOXD8P13378 290 aaPredicted RBP15.89■□□□□ 0.13
RIPK3-202ENST00000554338 CASTP20810 708 aaKnown RBP15.89■□□□□ 0.13
RIPK3-202ENST00000554338 PSEN2P49810 448 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 BFSP2Q13515 415 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 SART3Q15020 963 aaKnown RBP15.89■□□□□ 0.13
RIPK3-202ENST00000554338 DGKDQ16760 1214 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 PPTC7Q8NI37 304 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 IGDCC4Q8TDY8 1250 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.13
RIPK3-202ENST00000554338 ZFP91Q96JP5 570 aaPredicted RBP15.89■□□□□ 0.13
RIPK3-202ENST00000554338 SLC28A3Q9HAS3 691 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 PRDM6Q9NQX0 595 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 MAP3K20Q9NYL2 800 aaKnown RBP15.89■□□□□ 0.13
RIPK3-202ENST00000554338 GTF2IRD1Q9UHL9 959 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 PCDHA11Q9Y5I1 949 aa15.89■□□□□ 0.13
RIPK3-202ENST00000554338 PNMA6FA0A0J9YX94 578 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 GCOM1H8Y6P7 765 aaPredicted RBP15.88■□□□□ 0.13
RIPK3-202ENST00000554338 POLR2MP0CAP2 368 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 UBA1P22314 1058 aaKnown RBP15.88■□□□□ 0.13
RIPK3-202ENST00000554338 LAMC2Q13753 1193 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 COL9A3Q14050 684 aaPredicted RBP15.88■□□□□ 0.13
RIPK3-202ENST00000554338 PPP2R2DQ66LE6 453 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 CATIPQ7Z7H3 387 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 VSIG10LQ86VR7 867 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 RETREG2Q8NC44 543 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 CAGE1Q8TC20 777 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 PIBF1Q8WXW3 757 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 MYL10Q9BUA6 226 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 LY9Q9HBG7 655 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 HDAC6Q9UBN7 1215 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 FRMPD4Q14CM0 1322 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 TTC28Q96AY4 2481 aa15.88■□□□□ 0.13
RIPK3-202ENST00000554338 HAS3O00219 553 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 GGPS1O95749 300 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 ACTN1P12814 892 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 CCND2P30279 289 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 SP2Q02086 613 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 MFSD10Q14728 455 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 GPNMBQ14956 572 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 KIAA0753Q2KHM9 967 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 CELF3Q5SZQ8 465 aaKnown RBP15.87■□□□□ 0.13
RIPK3-202ENST00000554338 MYSM1Q5VVJ2 828 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 DHX37Q8IY37 1157 aaKnown RBP15.87■□□□□ 0.13
RIPK3-202ENST00000554338 ZNF654Q8IZM8 581 aa15.87■□□□□ 0.13
RIPK3-202ENST00000554338 SAMD3Q8N6K7 520 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms