RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 CYP2C18P33260 490 aa20.47■□□□□ 0.87
FOXN3-204ENST00000553840 PTPN11Q06124 597 aaPredicted RBP20.47■□□□□ 0.87
FOXN3-204ENST00000553840 LAMC2Q13753 1193 aa20.47■□□□□ 0.87
FOXN3-204ENST00000553840 PGM5Q15124 567 aa20.47■□□□□ 0.87
FOXN3-204ENST00000553840 NBPF20Q3BBV1 942 aa20.47■□□□□ 0.87
FOXN3-204ENST00000553840 NFRKBQ6P4R8 1299 aa20.47■□□□□ 0.87
FOXN3-204ENST00000553840 FCHSD1Q86WN1 690 aa20.47■□□□□ 0.87
FOXN3-204ENST00000553840 CUL5Q93034 780 aa20.47■□□□□ 0.87
FOXN3-204ENST00000553840 NEK1Q96PY6 1258 aa20.47■□□□□ 0.87
FOXN3-204ENST00000553840 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.47■□□□□ 0.877e-8■■■□□ 16.4
FOXN3-204ENST00000553840 DDX41Q9UJV9 622 aaKnown RBP20.47■□□□□ 0.87
FOXN3-204ENST00000553840 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.46■□□□□ 0.87
FOXN3-204ENST00000553840 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.46■□□□□ 0.87
FOXN3-204ENST00000553840 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
FOXN3-204ENST00000553840 MMP3P08254 477 aa20.46■□□□□ 0.87
FOXN3-204ENST00000553840 CCND2P30279 289 aa20.46■□□□□ 0.87
FOXN3-204ENST00000553840 ARHGAP1Q07960 439 aa20.46■□□□□ 0.87
FOXN3-204ENST00000553840 VSIG10LQ86VR7 867 aa20.46■□□□□ 0.87
FOXN3-204ENST00000553840 RPUSD2Q8IZ73 545 aaKnown RBP20.46■□□□□ 0.87
FOXN3-204ENST00000553840 AFG1LQ8WV93 481 aa20.46■□□□□ 0.87
FOXN3-204ENST00000553840 MTIF3Q9H2K0 278 aaKnown RBP20.46■□□□□ 0.87
FOXN3-204ENST00000553840 IL23AQ9NPF7 189 aa20.46■□□□□ 0.87
FOXN3-204ENST00000553840 STXBP5LQ9Y2K9 1186 aa20.46■□□□□ 0.87
FOXN3-204ENST00000553840 NEFLP07196 543 aa20.45■□□□□ 0.86
FOXN3-204ENST00000553840 CHMP4BP1P59074 171 aa20.45■□□□□ 0.86
FOXN3-204ENST00000553840 KRT32Q14532 448 aa20.45■□□□□ 0.86
FOXN3-204ENST00000553840 DGKDQ16760 1214 aa20.45■□□□□ 0.86
FOXN3-204ENST00000553840 DHX37Q8IY37 1157 aaKnown RBP20.45■□□□□ 0.86
FOXN3-204ENST00000553840 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
FOXN3-204ENST00000553840 EMID1Q96A84 441 aaPredicted RBP20.45■□□□□ 0.86
FOXN3-204ENST00000553840 NOC4LQ9BVI4 516 aaKnown RBP20.45■□□□□ 0.86
FOXN3-204ENST00000553840 TRMT13Q9NUP7 481 aaKnown RBP20.45■□□□□ 0.86
FOXN3-204ENST00000553840 NOD1Q9Y239 953 aa20.45■□□□□ 0.86
FOXN3-204ENST00000553840 STAM2O75886 525 aa20.44■□□□□ 0.86
FOXN3-204ENST00000553840 ACRP10323 421 aa20.44■□□□□ 0.86
FOXN3-204ENST00000553840 TGFB3P10600 412 aa20.44■□□□□ 0.86
FOXN3-204ENST00000553840 GNPTABQ3T906 1256 aa20.44■□□□□ 0.86
FOXN3-204ENST00000553840 TMEM240Q5SV17 173 aa20.44■□□□□ 0.86
FOXN3-204ENST00000553840 ZNF365Q70YC5 407 aa20.44■□□□□ 0.86
FOXN3-204ENST00000553840 SGMS1Q86VZ5 419 aa20.44■□□□□ 0.86
FOXN3-204ENST00000553840 FANCBQ8NB91 859 aa20.44■□□□□ 0.86
FOXN3-204ENST00000553840 PLEKHA8P1O95397 391 aa20.43■□□□□ 0.86
FOXN3-204ENST00000553840 FGBP02675 491 aa20.43■□□□□ 0.86
FOXN3-204ENST00000553840 RXRAP19793 462 aa20.43■□□□□ 0.86
FOXN3-204ENST00000553840 CCL23P55773 120 aa20.43■□□□□ 0.86
FOXN3-204ENST00000553840 TSGA10IPQ3SY00 556 aa20.43■□□□□ 0.86
FOXN3-204ENST00000553840 C16orf59Q7L2K0 433 aa20.43■□□□□ 0.86
FOXN3-204ENST00000553840 FAM161BQ96MY7 647 aa20.43■□□□□ 0.86
FOXN3-204ENST00000553840 KATNAL1Q9BW62 490 aa20.43■□□□□ 0.86
FOXN3-204ENST00000553840 LRRC2Q9BYS8 371 aa20.43■□□□□ 0.86
FOXN3-204ENST00000553840 TMEM265A0A087WTH1 108 aa20.42■□□□□ 0.86
FOXN3-204ENST00000553840 HMGB1P09429 215 aaKnown RBP20.42■□□□□ 0.86
FOXN3-204ENST00000553840 CYP2C9P11712 490 aa20.42■□□□□ 0.86
FOXN3-204ENST00000553840 DHX32Q7L7V1 743 aaKnown RBP20.42■□□□□ 0.86
FOXN3-204ENST00000553840 MICU3Q86XE3 530 aa20.42■□□□□ 0.86
FOXN3-204ENST00000553840 SRBD1Q8N5C6 995 aaKnown RBP20.42■□□□□ 0.86
FOXN3-204ENST00000553840 RETREG2Q8NC44 543 aa20.42■□□□□ 0.86
FOXN3-204ENST00000553840 PPTC7Q8NI37 304 aa20.42■□□□□ 0.86
FOXN3-204ENST00000553840 UMODL1Q5DID0 1318 aa20.42■□□□□ 0.86
FOXN3-204ENST00000553840 PIK3CDO00329 1044 aa20.41■□□□□ 0.86
FOXN3-204ENST00000553840 BFSP2Q13515 415 aa20.41■□□□□ 0.86
FOXN3-204ENST00000553840 MYSM1Q5VVJ2 828 aa20.41■□□□□ 0.86
FOXN3-204ENST00000553840 CCDC155Q8N6L0 562 aa20.41■□□□□ 0.86
FOXN3-204ENST00000553840 IL31RAQ8NI17 732 aa20.41■□□□□ 0.86
FOXN3-204ENST00000553840 SPATA33Q96N06 139 aa20.41■□□□□ 0.86
FOXN3-204ENST00000553840 WNT8AQ9H1J5 351 aa20.41■□□□□ 0.86
FOXN3-204ENST00000553840 SEMA6BQ9H3T3 888 aa20.41■□□□□ 0.86
FOXN3-204ENST00000553840 MLXIPQ9HAP2 919 aa20.41■□□□□ 0.86
FOXN3-204ENST00000553840 RBM28Q9NW13 759 aaKnown RBP20.41■□□□□ 0.86
FOXN3-204ENST00000553840 PPFIA4O75335 1185 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 RGS20O76081 388 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 GGPS1O95749 300 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 PFKMP08237 780 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 FGD1P98174 961 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 EXOSC10Q01780 885 aaKnown RBP20.4■□□□□ 0.86
FOXN3-204ENST00000553840 PTGISQ16647 500 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 CELF3Q5SZQ8 465 aaKnown RBP20.4■□□□□ 0.86
FOXN3-204ENST00000553840 TMTC3Q6ZXV5 915 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 SESTD1Q86VW0 696 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 RAB11FIP4Q86YS3 637 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 CMTR1Q8N1G2 835 aaKnown RBP20.4■□□□□ 0.86
FOXN3-204ENST00000553840 CCDC82Q8N4S0 544 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 C7orf31Q8N865 590 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 HERVK_113Q902F9 699 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 PSTPIP2Q9H939 334 aa20.4■□□□□ 0.86
FOXN3-204ENST00000553840 FRMPD4Q14CM0 1322 aa20.39■□□□□ 0.85
FOXN3-204ENST00000553840 PITPNM1O00562 1244 aa20.39■□□□□ 0.85
FOXN3-204ENST00000553840 RFC2P35250 354 aa20.39■□□□□ 0.85
FOXN3-204ENST00000553840 RASIP1Q5U651 963 aa20.39■□□□□ 0.85
FOXN3-204ENST00000553840 XRRA1Q6P2D8 792 aa20.39■□□□□ 0.85
FOXN3-204ENST00000553840 USP17L6PQ6QN14 398 aa20.39■□□□□ 0.85
FOXN3-204ENST00000553840 SLC17A8Q8NDX2 589 aa20.39■□□□□ 0.85
FOXN3-204ENST00000553840 SCLYQ96I15 445 aa20.39■□□□□ 0.85
FOXN3-204ENST00000553840 GUCD1Q96NT3 240 aa20.39■□□□□ 0.85
FOXN3-204ENST00000553840 ZBTB43O43298 467 aa20.38■□□□□ 0.85
FOXN3-204ENST00000553840 UBA1P22314 1058 aaKnown RBP20.38■□□□□ 0.85
FOXN3-204ENST00000553840 DNAJB2P25686 324 aa20.38■□□□□ 0.85
FOXN3-204ENST00000553840 PSEN2P49810 448 aa20.38■□□□□ 0.85
FOXN3-204ENST00000553840 COL9A3Q14050 684 aaPredicted RBP20.38■□□□□ 0.85
FOXN3-204ENST00000553840 NEDD9Q14511 834 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms