RNA–Protein interactions for RNA: ENST00000553429.1

AC025884.2-201, humanhuman

BASIC

Gene AC025884.2, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025884.2-201ENST00000553429 ORC3Q9UBD5 711 aaPredicted RBP28.2■■■□□ 2.1
AC025884.2-201ENST00000553429 PCDHA6Q9UN73 950 aa28.2■■■□□ 2.1
AC025884.2-201ENST00000553429 PCDHA8Q9Y5H6 950 aa28.2■■■□□ 2.1
AC025884.2-201ENST00000553429 FOSP01100 380 aaPredicted RBP28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 SMPD1P17405 629 aa28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 GNA11P29992 359 aa28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 CCND2P30279 289 aa28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 NKX3-2P78367 333 aa28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 TNFAIP2Q03169 654 aa28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 AP3B2Q13367 1082 aa28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 CCDC83Q8IWF9 413 aa28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 LLPHQ9BRT6 129 aaKnown RBP28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 UPF3AQ9H1J1 476 aaKnown RBP28.19■■■□□ 2.1
AC025884.2-201ENST00000553429 SPDYE3A6NKU9 549 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 ADAMTS3O15072 1205 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 ADAMTS4O75173 837 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 RGS20O76081 388 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 MRPS9P82933 396 aaKnown RBP28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 DUSP28Q4G0W2 176 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 PCNX4Q63HM2 1172 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 XRRA1Q6P2D8 792 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 SCFD2Q8WU76 684 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 XPNPEP3Q9NQH7 507 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 Q9Y3F1 56 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 NR2E3Q9Y5X4 410 aa28.18■■■□□ 2.1
AC025884.2-201ENST00000553429 JAK2O60674 1132 aa28.17■■■□□ 2.1
AC025884.2-201ENST00000553429 DTNBO60941 627 aa28.17■■■□□ 2.1
AC025884.2-201ENST00000553429 STAM2O75886 525 aa28.17■■■□□ 2.1
AC025884.2-201ENST00000553429 FARP2O94887 1054 aaPredicted RBP28.17■■■□□ 2.1
AC025884.2-201ENST00000553429 MYCLP12524 364 aaPredicted RBP28.17■■■□□ 2.1
AC025884.2-201ENST00000553429 ARRDC4Q8NCT1 418 aa28.17■■■□□ 2.1
AC025884.2-201ENST00000553429 WASF1Q92558 559 aa28.17■■■□□ 2.1
AC025884.2-201ENST00000553429 WDR11Q9BZH6 1224 aa28.17■■■□□ 2.1
AC025884.2-201ENST00000553429 SYNRGQ9UMZ2 1314 aa28.17■■■□□ 2.1
AC025884.2-201ENST00000553429 GJA9P57773 515 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 LRRC41Q15345 812 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 NPY5RQ15761 445 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 TMEM63BQ5T3F8 832 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 MCTP2Q6DN12 878 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 CCDC62Q6P9F0 684 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 SLC17A8Q8NDX2 589 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 BICD2Q8TD16 824 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 EHMT1Q9H9B1 1298 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 TMEM260Q9NX78 707 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 DNAH12Q6ZR08 3092 aa28.16■■■□□ 2.1
AC025884.2-201ENST00000553429 DNM1LO00429 736 aa28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 ARIH2O95376 493 aa28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 PGK1P00558 417 aa28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 GALNT17Q6IS24 598 aa28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 REXO1Q8N1G1 1221 aaKnown RBP28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 DAGLBQ8NCG7 672 aa28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 KLHDC9Q8NEP7 349 aa28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 DIS3LQ8TF46 1054 aaKnown RBP28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 TMX3Q96JJ7 454 aa28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 ANO3Q9BYT9 981 aa28.15■■■□□ 2.1
AC025884.2-201ENST00000553429 DLL1O00548 723 aa28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 NKRFO15226 690 aaKnown RBP eCLIP28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 CTAGE5O15320 804 aa28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 CST5P28325 142 aaPredicted RBP28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 NLRP5P59047 1200 aa28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 TTLL4Q14679 1199 aa28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 SEPT14Q6ZU15 432 aa28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 INPP4AQ96PE3 977 aaPredicted RBP28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 PHF20Q9BVI0 1012 aa28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 PCDHA4Q9UN74 947 aa28.14■■■□□ 2.1
AC025884.2-201ENST00000553429 M0R2N6 131 aa28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 COL6A1P12109 1028 aa28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 SREBF1P36956 1147 aa28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 JAKMIP3Q5VZ66 844 aa28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 CCSAPQ6IQ19 270 aaPredicted RBP28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 TLK2Q86UE8 772 aa28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 CRYGNQ8WXF5 182 aa28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 PGBD1Q96JS3 809 aa28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 ALG1Q9BT22 464 aa28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 ALPK3Q96L96 1907 aa28.13■■■□□ 2.09
AC025884.2-201ENST00000553429 DOCK5Q9H7D0 1870 aa28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 TXNP10599 105 aaKnown RBP28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 XBP1P17861 261 aa28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 PTGS1P23219 599 aa28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 ICAM3P32942 547 aa28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 GJC2Q5T442 439 aaPredicted RBP28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 KCNV1Q6PIU1 500 aa28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 RNF180Q86T96 592 aa28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 PAWRQ96IZ0 340 aaKnown RBP28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 DDX41Q9UJV9 622 aaKnown RBP28.12■■■□□ 2.09
AC025884.2-201ENST00000553429 MYADML2A6NDP7 307 aa28.11■■■□□ 2.09
AC025884.2-201ENST00000553429 NECAB2Q7Z6G3 386 aa28.11■■■□□ 2.09
AC025884.2-201ENST00000553429 BLIDQ8IZY5 108 aa28.11■■■□□ 2.09
AC025884.2-201ENST00000553429 ZFP91Q96JP5 570 aaPredicted RBP28.11■■■□□ 2.09
AC025884.2-201ENST00000553429 TSEN34Q9BSV6 310 aaKnown RBP28.11■■■□□ 2.09
AC025884.2-201ENST00000553429 SPC25Q9HBM1 224 aa28.11■■■□□ 2.09
AC025884.2-201ENST00000553429 KCNJ14Q9UNX9 436 aa28.11■■■□□ 2.09
AC025884.2-201ENST00000553429 UBIAD1Q9Y5Z9 338 aa28.11■■■□□ 2.09
AC025884.2-201ENST00000553429 DYNC1LI2O43237 492 aaPredicted RBP28.1■■■□□ 2.09
AC025884.2-201ENST00000553429 TGFB3P10600 412 aa28.1■■■□□ 2.09
AC025884.2-201ENST00000553429 HMGN5P82970 282 aaKnown RBP28.1■■■□□ 2.09
AC025884.2-201ENST00000553429 GNPTABQ3T906 1256 aa28.1■■■□□ 2.09
AC025884.2-201ENST00000553429 RASGRP4Q8TDF6 673 aa28.1■■■□□ 2.09
AC025884.2-201ENST00000553429 PRO3102Q9H379 93 aa28.1■■■□□ 2.09
AC025884.2-201ENST00000553429 GJB4Q9NTQ9 266 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms