RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 NOC4LQ9BVI4 516 aaKnown RBP16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 ZNF576Q9H609 170 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 TRMT13Q9NUP7 481 aaKnown RBP16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 SLC12A7Q9Y666 1083 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 PLXNA1Q9UIW2 1896 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 ZNFX1Q9P2E3 1918 aaKnown RBP16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 SH2B2O14492 632 aaPredicted RBP16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 CYP2C9P11712 490 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 EDNRBP24530 442 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 QRICH1Q2TAL8 776 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 ASPRV1Q53RT3 343 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 SEPT14Q6ZU15 432 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 RGS22Q8NE09 1264 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 IGDCC4Q8TDY8 1250 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 ANKS1AQ92625 1134 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 SNX21Q969T3 373 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 SCLYQ96I15 445 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 TAAR1Q96RJ0 339 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 PBX4Q9BYU1 374 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 MTIF3Q9H2K0 278 aaKnown RBP16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 CXXC1Q9P0U4 656 aaPredicted RBP16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 ABCB11O95342 1321 aa16.08■□□□□ 0.16
SMARCC2-212ENST00000552566 SMCHD1A6NHR9 2005 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 NKRFO15226 690 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 HSP90AA1P07900 732 aaKnown RBP16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 SUPT20HL2P0C7V6 817 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 TTLL4Q14679 1199 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 NBPF20Q3BBV1 942 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 RASIP1Q5U651 963 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 FBXO11Q86XK2 927 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 SYTL5Q8TDW5 730 aaPredicted RBP16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 COL25A1Q9BXS0 654 aaPredicted RBP16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 WNT8AQ9H1J5 351 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 MSRAQ9UJ68 235 aa16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 LAMA2P24043 3122 aaKnown RBP16.07■□□□□ 0.16
SMARCC2-212ENST00000552566 KLF18A0A0U1RQI7 1052 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 ZBBXA8MT70 800 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 ARIH2O95376 493 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 CALM1P0DP23 149 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 CALM2P0DP24 149 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 CALM3P0DP25 149 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 APOBRQ0VD83 1088 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 SGMS1Q86VZ5 419 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 RPUSD2Q8IZ73 545 aaKnown RBP16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 NSUN6Q8TEA1 469 aaKnown RBP16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 RMDN3Q96TC7 470 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 LY9Q9HBG7 655 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 SH2B1Q9NRF2 756 aaPredicted RBP16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 COL20A1Q9P218 1284 aa16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
SMARCC2-212ENST00000552566 A6NJR5 290 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 ZBTB43O43298 467 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 KPNA6O60684 536 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 CFBP00751 764 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 TOB2Q14106 344 aaPredicted RBP16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 SEC23AQ15436 765 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 LY6KQ17RY6 165 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 ARHGEF16Q5VV41 709 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 DEFB128Q7Z7B8 93 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 STAG2Q8N3U4 1231 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 PPM1EQ8WY54 764 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 ZNF274Q96GC6 653 aaPredicted RBP16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 AGXT2Q9BYV1 514 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 SLKQ9H2G2 1235 aaPredicted RBP16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 NKX2-4Q9H2Z4 354 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 NOD1Q9Y239 953 aa16.05■□□□□ 0.16
SMARCC2-212ENST00000552566 CCDC196A0A1B0GTZ2 297 aa16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 GOLGA8BA8MQT2 603 aa16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 K7ELQ4 463 aaPredicted RBP16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 EIF2AK2P19525 551 aaKnown RBP16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 RAB30Q15771 203 aa16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 STXBP2Q15833 593 aa16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 CPLX2Q6PUV4 134 aaKnown RBP16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 AFG1LQ8WV93 481 aa16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 GAS2L1Q99501 681 aaPredicted RBP16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 PRDM12Q9H4Q4 367 aa16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 SLC4A7Q9Y6M7 1214 aa16.04■□□□□ 0.16
SMARCC2-212ENST00000552566 KLRF2D3W0D1 207 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 DDAH1O94760 285 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 GH1P01241 217 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 KIF5BP33176 963 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 RABGGTBP53611 331 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 COL9A3Q14050 684 aaPredicted RBP16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 ZNF654Q8IZM8 581 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 RETREG2Q8NC44 543 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 CTCFLQ8NI51 663 aaPredicted RBP16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 IWS1Q96ST2 819 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 AMNQ9BXJ7 453 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 SLC28A3Q9HAS3 691 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 TPCN1Q9ULQ1 816 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 YBX2Q9Y2T7 364 aaKnown RBP16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 A0A0C4DFX4 3053 aa16.03■□□□□ 0.16
SMARCC2-212ENST00000552566 CPLX1O14810 134 aa16.02■□□□□ 0.16
SMARCC2-212ENST00000552566 METAP2P50579 478 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMARCC2-212ENST00000552566 RCAN1P53805 252 aa16.02■□□□□ 0.16
SMARCC2-212ENST00000552566 EVCP57679 992 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms