RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 TANGO6Q9C0B7 1094 aa14.48□□□□□ -0.09
CACNB3-219ENST00000551544 MLXIPQ9HAP2 919 aa14.48□□□□□ -0.09
CACNB3-219ENST00000551544 PLAGL2Q9UPG8 496 aa14.48□□□□□ -0.09
CACNB3-219ENST00000551544 SIK3Q9Y2K2 1263 aa14.48□□□□□ -0.09
CACNB3-219ENST00000551544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 VGLL3A8MV65 326 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 RIMBP2O15034 1052 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 AKR1B10O60218 316 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 USO1O60763 962 aaKnown RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 SSBP05455 408 aaKnown RBP eCLIP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 EIF4A3P38919 411 aaKnown RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 CDK17Q00537 523 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 C2orf54Q08AI8 447 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 MAN2A1Q16706 1144 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 ASPRV1Q53RT3 343 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 GSPT2Q8IYD1 628 aaKnown RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 GUF1Q8N442 669 aaKnown RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 PCDHA13Q9Y5I0 950 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 LRRC53A6NM62 1247 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 KIF11P52732 1056 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 TTBK2Q6IQ55 1244 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 CCDC155Q8N6L0 562 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 TBC1D16Q8TBP0 767 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 FAM163AQ96GL9 167 aaPredicted RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 RBM17Q96I25 401 aaKnown RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 PURBQ96QR8 312 aaKnown RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 TSGA10Q9BZW7 698 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 ACBD3Q9H3P7 528 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 CAPN6Q9Y6Q1 641 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 GAKO14976 1311 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 ANO9A1A5B4 782 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 hCG_1984214I3L0E3 225 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 MOCS3O95396 460 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 FGFR1OPO95684 399 aaKnown RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 SLC16A2P36021 539 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 ECM1Q16610 540 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 ZNF713Q8N859 430 aaPredicted RBP14.47□□□□□ -0.09
CACNB3-219ENST00000551544 TBC1D22AQ8WUA7 517 aa14.47□□□□□ -0.09
CACNB3-219ENST00000551544 TACC1O75410 805 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 SERPINB2P05120 415 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 NOVP48745 357 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 PDIA5Q14554 519 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 ADGRF4Q8IZF3 695 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 RPGRIP1Q96KN7 1286 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 PSMB7Q99436 277 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 JMJD4Q9H9V9 463 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 TBC1D7Q9P0N9 293 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 DDX25Q9UHL0 483 aaKnown RBP14.46□□□□□ -0.09
CACNB3-219ENST00000551544 CDK5RAP2Q96SN8 1893 aa14.46□□□□□ -0.09
CACNB3-219ENST00000551544 MCM3P25205 808 aa14.46□□□□□ -0.1
CACNB3-219ENST00000551544 CRY2Q49AN0 593 aa14.46□□□□□ -0.1
CACNB3-219ENST00000551544 MAP9Q49MG5 647 aa14.46□□□□□ -0.1
CACNB3-219ENST00000551544 CCDC84Q86UT8 332 aaPredicted RBP14.46□□□□□ -0.1
CACNB3-219ENST00000551544 ANKRD13CQ8N6S4 541 aa14.46□□□□□ -0.1
CACNB3-219ENST00000551544 FAM71BQ8TC56 605 aa14.46□□□□□ -0.1
CACNB3-219ENST00000551544 TSG101Q99816 390 aa14.46□□□□□ -0.1
CACNB3-219ENST00000551544 TRIM34Q9BYJ4 488 aa14.46□□□□□ -0.1
CACNB3-219ENST00000551544 MPHOSPH10O00566 681 aaKnown RBP14.45□□□□□ -0.1
CACNB3-219ENST00000551544 RAD21O60216 631 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 PPP1R11O60927 126 aaPredicted RBP14.45□□□□□ -0.1
CACNB3-219ENST00000551544 HNRNPH3P31942 346 aaKnown RBP14.45□□□□□ -0.1
CACNB3-219ENST00000551544 LRRC63Q05C16 580 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 LRRC55Q6ZSA7 311 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 CACNA2D4Q7Z3S7 1137 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 TRIM58Q8NG06 486 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 IQCDQ96DY2 449 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 RASSF4Q9H2L5 321 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 SH2D4AQ9H788 454 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 DDX4Q9NQI0 724 aaKnown RBP14.45□□□□□ -0.1
CACNB3-219ENST00000551544 PNMA6FA0A0J9YX94 578 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 TTLL1O95922 423 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 ACTN2P35609 894 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 KCTD1Q719H9 257 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 COG1Q8WTW3 980 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 RIC8AQ9NPQ8 531 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 SNX12Q9UMY4 172 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 JRKLQ9Y4A0 524 aa14.45□□□□□ -0.1
CACNB3-219ENST00000551544 TARSL2A2RTX5 802 aaKnown RBP14.44□□□□□ -0.1
CACNB3-219ENST00000551544 TRAF5O00463 557 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 MYBL2P10244 700 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 CXCR5P32302 372 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 MATR3P43243 847 aaKnown RBP eCLIP14.44□□□□□ -0.1
CACNB3-219ENST00000551544 MRPS25P82663 173 aaKnown RBP14.44□□□□□ -0.1
CACNB3-219ENST00000551544 GABPAQ06546 454 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 ZNF543Q08ER8 600 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 COASYQ13057 564 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 TMEM119Q4V9L6 283 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 DHX37Q8IY37 1157 aaKnown RBP14.44□□□□□ -0.1
CACNB3-219ENST00000551544 MYOCDQ8IZQ8 938 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 PLCD3Q8N3E9 789 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 CERKQ8TCT0 537 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 HAS1Q92839 578 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 NLRC4Q9NPP4 1024 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L10C9JJH3 530 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 MYO1CO00159 1063 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 BBOX1O75936 387 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 SLURP2P0DP57 97 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 SNHG28P0DPA3 235 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 MAGEA1P43355 309 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms