RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 RGS20O76081 388 aa25.82■■□□□ 1.72
BRF1-216ENST00000550208 FARP2O94887 1054 aaPredicted RBP25.82■■□□□ 1.72
BRF1-216ENST00000550208 GNA11P29992 359 aa25.82■■□□□ 1.72
BRF1-216ENST00000550208 IRX5P78411 483 aaPredicted RBP25.82■■□□□ 1.72
BRF1-216ENST00000550208 UBE2Q1Q7Z7E8 422 aa25.82■■□□□ 1.72
BRF1-216ENST00000550208 TEX2Q8IWB9 1127 aa25.82■■□□□ 1.72
BRF1-216ENST00000550208 ARRDC4Q8NCT1 418 aa25.82■■□□□ 1.72
BRF1-216ENST00000550208 CCDC148Q8NFR7 591 aa25.82■■□□□ 1.72
BRF1-216ENST00000550208 PAWRQ96IZ0 340 aaKnown RBP25.82■■□□□ 1.72
BRF1-216ENST00000550208 RTEL1Q9NZ71 1219 aa25.82■■□□□ 1.72
BRF1-216ENST00000550208 DYNC1LI2O43237 492 aaPredicted RBP25.81■■□□□ 1.72
BRF1-216ENST00000550208 FOSP01100 380 aaPredicted RBP25.81■■□□□ 1.72
BRF1-216ENST00000550208 LRRC41Q15345 812 aa25.81■■□□□ 1.72
BRF1-216ENST00000550208 DUSP28Q4G0W2 176 aa25.81■■□□□ 1.72
BRF1-216ENST00000550208 SCFD2Q8WU76 684 aa25.81■■□□□ 1.72
BRF1-216ENST00000550208 GJB4Q9NTQ9 266 aa25.81■■□□□ 1.72
BRF1-216ENST00000550208 KCNJ14Q9UNX9 436 aa25.81■■□□□ 1.72
BRF1-216ENST00000550208 FRMPD3Q5JV73 1810 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 ADAMTS4O75173 837 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 ARIH2O95376 493 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 TXNP10599 105 aaKnown RBP25.8■■□□□ 1.72
BRF1-216ENST00000550208 PCNX4Q63HM2 1172 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 CCDC62Q6P9F0 684 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 COPS5Q92905 334 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 TMX3Q96JJ7 454 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 ALG1Q9BT22 464 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 ANO3Q9BYT9 981 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 SYNRGQ9UMZ2 1314 aa25.8■■□□□ 1.72
BRF1-216ENST00000550208 MCM2P49736 904 aa25.79■■□□□ 1.72
BRF1-216ENST00000550208 GJA9P57773 515 aa25.79■■□□□ 1.72
BRF1-216ENST00000550208 TTLL4Q14679 1199 aa25.79■■□□□ 1.72
BRF1-216ENST00000550208 RASGRP4Q8TDF6 673 aa25.79■■□□□ 1.72
BRF1-216ENST00000550208 WASF1Q92558 559 aa25.79■■□□□ 1.72
BRF1-216ENST00000550208 LLPHQ9BRT6 129 aaKnown RBP25.79■■□□□ 1.72
BRF1-216ENST00000550208 UPF3AQ9H1J1 476 aaKnown RBP25.79■■□□□ 1.72
BRF1-216ENST00000550208 MYADML2A6NDP7 307 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 AP3B2Q13367 1082 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 LY6KQ17RY6 165 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 XRRA1Q6P2D8 792 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 RNF180Q86T96 592 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 REXO1Q8N1G1 1221 aaKnown RBP25.78■■□□□ 1.72
BRF1-216ENST00000550208 KLHDC9Q8NEP7 349 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 BICD2Q8TD16 824 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 AP5M1Q9H0R1 490 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 EHMT1Q9H9B1 1298 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 DDX41Q9UJV9 622 aaKnown RBP25.78■■□□□ 1.72
BRF1-216ENST00000550208 PCDHA4Q9UN74 947 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 Q9Y3F1 56 aa25.78■■□□□ 1.72
BRF1-216ENST00000550208 DNM1LO00429 736 aa25.77■■□□□ 1.72
BRF1-216ENST00000550208 CTAGE5O15320 804 aa25.77■■□□□ 1.72
BRF1-216ENST00000550208 C6orf222P0C671 652 aaPredicted RBP25.77■■□□□ 1.72
BRF1-216ENST00000550208 NPY5RQ15761 445 aa25.77■■□□□ 1.72
BRF1-216ENST00000550208 NECAB2Q7Z6G3 386 aa25.77■■□□□ 1.72
BRF1-216ENST00000550208 TLK2Q86UE8 772 aa25.77■■□□□ 1.72
BRF1-216ENST00000550208 PHF20Q9BVI0 1012 aa25.77■■□□□ 1.72
BRF1-216ENST00000550208 SPC25Q9HBM1 224 aa25.77■■□□□ 1.72
BRF1-216ENST00000550208 MRVI1Q9Y6F6 885 aa25.77■■□□□ 1.72
BRF1-216ENST00000550208 KIAA1217Q5T5P2 1943 aa25.76■■□□□ 1.72
BRF1-216ENST00000550208 STAM2O75886 525 aa25.76■■□□□ 1.71
BRF1-216ENST00000550208 BEX3Q00994 111 aa25.76■■□□□ 1.71
BRF1-216ENST00000550208 BLIDQ8IZY5 108 aa25.76■■□□□ 1.71
BRF1-216ENST00000550208 FAM177A1Q8N128 213 aaPredicted RBP25.76■■□□□ 1.71
BRF1-216ENST00000550208 C11orf49Q9H6J7 331 aa25.76■■□□□ 1.71
BRF1-216ENST00000550208 KBTBD13C9JR72 458 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 NKRFO15226 690 aaKnown RBP eCLIP25.75■■□□□ 1.71
BRF1-216ENST00000550208 COL6A1P12109 1028 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 XBP1P17861 261 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 FOSBP53539 338 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 NKX3-2P78367 333 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 KCNA10Q16322 511 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 GNASQ5JWF2 1037 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 MCTP2Q6DN12 878 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 CCSAPQ6IQ19 270 aaPredicted RBP25.75■■□□□ 1.71
BRF1-216ENST00000550208 GALNT17Q6IS24 598 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 DAGLBQ8NCG7 672 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 OR6J1Q8NGC5 347 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 INPP4AQ96PE3 977 aaPredicted RBP25.75■■□□□ 1.71
BRF1-216ENST00000550208 UBIAD1Q9Y5Z9 338 aa25.75■■□□□ 1.71
BRF1-216ENST00000550208 BRCA2P51587 3418 aa25.74■■□□□ 1.71
BRF1-216ENST00000550208 SPATA31C2B4DYI2 1134 aa25.74■■□□□ 1.71
BRF1-216ENST00000550208 M0R2N6 131 aa25.74■■□□□ 1.71
BRF1-216ENST00000550208 ITGB5P18084 799 aa25.74■■□□□ 1.71
BRF1-216ENST00000550208 SREBF1P36956 1147 aa25.74■■□□□ 1.71
BRF1-216ENST00000550208 SP2Q02086 613 aa25.74■■□□□ 1.71
BRF1-216ENST00000550208 SEMA3FQ13275 785 aa25.74■■□□□ 1.71
BRF1-216ENST00000550208 KCNV1Q6PIU1 500 aa25.74■■□□□ 1.71
BRF1-216ENST00000550208 FERMT2Q96AC1 680 aa25.74■■□□□ 1.71
BRF1-216ENST00000550208 SENP6Q9GZR1 1112 aaPredicted RBP25.74■■□□□ 1.71
BRF1-216ENST00000550208 CST5P28325 142 aaPredicted RBP25.73■■□□□ 1.71
BRF1-216ENST00000550208 ICAM3P32942 547 aa25.73■■□□□ 1.71
BRF1-216ENST00000550208 ARHGAP4P98171 946 aa25.73■■□□□ 1.71
BRF1-216ENST00000550208 FSCN1Q16658 493 aaKnown RBP25.73■■□□□ 1.71
BRF1-216ENST00000550208 GNPTABQ3T906 1256 aa25.73■■□□□ 1.71
BRF1-216ENST00000550208 NLRX1Q86UT6 975 aa25.73■■□□□ 1.71
BRF1-216ENST00000550208 CYP2W1Q8TAV3 490 aa25.73■■□□□ 1.71
BRF1-216ENST00000550208 TSEN34Q9BSV6 310 aaKnown RBP25.73■■□□□ 1.71
BRF1-216ENST00000550208 GH1P01241 217 aa25.72■■□□□ 1.71
BRF1-216ENST00000550208 TGFB3P10600 412 aa25.72■■□□□ 1.71
BRF1-216ENST00000550208 MLLT1Q03111 559 aaPredicted RBP25.72■■□□□ 1.71
BRF1-216ENST00000550208 ARHGAP1Q07960 439 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms