RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 CYP2C18P33260 490 aa27.91■■■□□ 2.06
USP44-205ENST00000549639 ARHGAP1Q07960 439 aa27.91■■■□□ 2.06
USP44-205ENST00000549639 LAMC2Q13753 1193 aa27.91■■■□□ 2.06
USP44-205ENST00000549639 PGM5Q15124 567 aa27.91■■■□□ 2.06
USP44-205ENST00000549639 NBPF20Q3BBV1 942 aa27.91■■■□□ 2.06
USP44-205ENST00000549639 IL23AQ9NPF7 189 aa27.91■■■□□ 2.06
USP44-205ENST00000549639 SLC12A7Q9Y666 1083 aa27.91■■■□□ 2.06
USP44-205ENST00000549639 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.9■■■□□ 2.06
USP44-205ENST00000549639 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.9■■■□□ 2.06
USP44-205ENST00000549639 MMP3P08254 477 aa27.9■■■□□ 2.06
USP44-205ENST00000549639 TGFB3P10600 412 aa27.9■■■□□ 2.06
USP44-205ENST00000549639 CASTP20810 708 aaKnown RBP27.9■■■□□ 2.06
USP44-205ENST00000549639 CCND2P30279 289 aa27.9■■■□□ 2.06
USP44-205ENST00000549639 TSGA10IPQ3SY00 556 aa27.9■■■□□ 2.06
USP44-205ENST00000549639 TMEM240Q5SV17 173 aa27.9■■■□□ 2.06
USP44-205ENST00000549639 SGMS1Q86VZ5 419 aa27.9■■■□□ 2.06
USP44-205ENST00000549639 SKAP1Q86WV1 359 aa27.9■■■□□ 2.06
USP44-205ENST00000549639 AFG1LQ8WV93 481 aa27.9■■■□□ 2.06
USP44-205ENST00000549639 MYL10Q9BUA6 226 aa27.9■■■□□ 2.06
USP44-205ENST00000549639 TMEM265A0A087WTH1 108 aa27.89■■■□□ 2.06
USP44-205ENST00000549639 MYCLP12524 364 aaPredicted RBP27.89■■■□□ 2.06
USP44-205ENST00000549639 KRT32Q14532 448 aa27.89■■■□□ 2.06
USP44-205ENST00000549639 FAM47CQ5HY64 1035 aa27.89■■■□□ 2.06
USP44-205ENST00000549639 C16orf59Q7L2K0 433 aa27.89■■■□□ 2.06
USP44-205ENST00000549639 NEK1Q96PY6 1258 aa27.89■■■□□ 2.06
USP44-205ENST00000549639 STAM2O75886 525 aa27.88■■■□□ 2.05
USP44-205ENST00000549639 DGKDQ16760 1214 aa27.88■■■□□ 2.05
USP44-205ENST00000549639 SYNE3Q6ZMZ3 975 aa27.88■■■□□ 2.05
USP44-205ENST00000549639 FCHSD1Q86WN1 690 aa27.88■■■□□ 2.05
USP44-205ENST00000549639 RPUSD2Q8IZ73 545 aaKnown RBP27.88■■■□□ 2.05
USP44-205ENST00000549639 MTIF3Q9H2K0 278 aaKnown RBP27.88■■■□□ 2.05
USP44-205ENST00000549639 TRMT13Q9NUP7 481 aaKnown RBP27.88■■■□□ 2.05
USP44-205ENST00000549639 RASIP1Q5U651 963 aa27.87■■■□□ 2.05
USP44-205ENST00000549639 DHX37Q8IY37 1157 aaKnown RBP27.87■■■□□ 2.05
USP44-205ENST00000549639 PPTC7Q8NI37 304 aa27.87■■■□□ 2.05
USP44-205ENST00000549639 PIBF1Q8WXW3 757 aa27.87■■■□□ 2.05
USP44-205ENST00000549639 CUL5Q93034 780 aa27.87■■■□□ 2.05
USP44-205ENST00000549639 PIK3CDO00329 1044 aa27.86■■■□□ 2.05
USP44-205ENST00000549639 RGS20O76081 388 aa27.86■■■□□ 2.05
USP44-205ENST00000549639 GNPTABQ3T906 1256 aa27.86■■■□□ 2.05
USP44-205ENST00000549639 ZNF365Q70YC5 407 aa27.86■■■□□ 2.05
USP44-205ENST00000549639 SESTD1Q86VW0 696 aa27.86■■■□□ 2.05
USP44-205ENST00000549639 SRBD1Q8N5C6 995 aaKnown RBP27.86■■■□□ 2.05
USP44-205ENST00000549639 FANCBQ8NB91 859 aa27.86■■■□□ 2.05
USP44-205ENST00000549639 FRMPD4Q14CM0 1322 aa27.86■■■□□ 2.05
USP44-205ENST00000549639 PLEKHA8P1O95397 391 aa27.85■■■□□ 2.05
USP44-205ENST00000549639 FGBP02675 491 aa27.85■■■□□ 2.05
USP44-205ENST00000549639 PFKMP08237 780 aa27.85■■■□□ 2.05
USP44-205ENST00000549639 HMGB1P09429 215 aaKnown RBP27.85■■■□□ 2.05
USP44-205ENST00000549639 DHX32Q7L7V1 743 aaKnown RBP27.85■■■□□ 2.05
USP44-205ENST00000549639 KATNAL1Q9BW62 490 aa27.85■■■□□ 2.05
USP44-205ENST00000549639 UMODL1Q5DID0 1318 aa27.85■■■□□ 2.05
USP44-205ENST00000549639 PITPNM1O00562 1244 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 ACRP10323 421 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 CCL23P55773 120 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 MYSM1Q5VVJ2 828 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 XRRA1Q6P2D8 792 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 IL31RAQ8NI17 732 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 SMARCC2Q8TAQ2 1214 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 HERVK_113Q902F9 699 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 WNT8AQ9H1J5 351 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 SEMA6BQ9H3T3 888 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 NOD1Q9Y239 953 aa27.84■■■□□ 2.05
USP44-205ENST00000549639 PPFIA4O75335 1185 aa27.83■■■□□ 2.05
USP44-205ENST00000549639 EXOSC10Q01780 885 aaKnown RBP27.83■■■□□ 2.05
USP44-205ENST00000549639 COL9A3Q14050 684 aaPredicted RBP27.83■■■□□ 2.05
USP44-205ENST00000549639 CELF3Q5SZQ8 465 aaKnown RBP27.83■■■□□ 2.05
USP44-205ENST00000549639 TMTC3Q6ZXV5 915 aa27.83■■■□□ 2.05
USP44-205ENST00000549639 GUCD1Q96NT3 240 aa27.83■■■□□ 2.05
USP44-205ENST00000549639 LRRC2Q9BYS8 371 aa27.83■■■□□ 2.05
USP44-205ENST00000549639 RBM28Q9NW13 759 aaKnown RBP27.83■■■□□ 2.05
USP44-205ENST00000549639 COL6A3P12111 3177 aa27.83■■■□□ 2.05
USP44-205ENST00000549639 CYP2C9P11712 490 aa27.82■■■□□ 2.04
USP44-205ENST00000549639 HOXD8P13378 290 aaPredicted RBP27.82■■■□□ 2.04
USP44-205ENST00000549639 RXRAP19793 462 aa27.82■■■□□ 2.04
USP44-205ENST00000549639 RFC2P35250 354 aa27.82■■■□□ 2.04
USP44-205ENST00000549639 BFSP2Q13515 415 aa27.82■■■□□ 2.04
USP44-205ENST00000549639 MICU3Q86XE3 530 aa27.82■■■□□ 2.04
USP44-205ENST00000549639 KAT2BQ92831 832 aa27.82■■■□□ 2.04
USP44-205ENST00000549639 ICAM3P32942 547 aa27.81■■■□□ 2.04
USP44-205ENST00000549639 APOA5Q6Q788 366 aa27.81■■■□□ 2.04
USP44-205ENST00000549639 CCDC155Q8N6L0 562 aa27.81■■■□□ 2.04
USP44-205ENST00000549639 RETREG2Q8NC44 543 aa27.81■■■□□ 2.04
USP44-205ENST00000549639 FAM161BQ96MY7 647 aa27.81■■■□□ 2.04
USP44-205ENST00000549639 SPATA33Q96N06 139 aa27.81■■■□□ 2.04
USP44-205ENST00000549639 INPP4AQ96PE3 977 aaPredicted RBP27.81■■■□□ 2.04
USP44-205ENST00000549639 MEIS2O14770 477 aa27.8■■■□□ 2.04
USP44-205ENST00000549639 GGPS1O95749 300 aa27.8■■■□□ 2.04
USP44-205ENST00000549639 F2P00734 622 aa27.8■■■□□ 2.04
USP44-205ENST00000549639 UBA1P22314 1058 aaKnown RBP27.8■■■□□ 2.04
USP44-205ENST00000549639 PTGISQ16647 500 aa27.8■■■□□ 2.04
USP44-205ENST00000549639 TEX2Q8IWB9 1127 aa27.8■■■□□ 2.04
USP44-205ENST00000549639 RASEFQ8IZ41 740 aa27.8■■■□□ 2.04
USP44-205ENST00000549639 PSTPIP2Q9H939 334 aa27.8■■■□□ 2.04
USP44-205ENST00000549639 MLXIPQ9HAP2 919 aa27.8■■■□□ 2.04
USP44-205ENST00000549639 NEFLP07196 543 aa27.79■■■□□ 2.04
USP44-205ENST00000549639 DNAJB2P25686 324 aa27.79■■■□□ 2.04
USP44-205ENST00000549639 PSEN2P49810 448 aa27.79■■■□□ 2.04
USP44-205ENST00000549639 RCAN1P53805 252 aa27.79■■■□□ 2.04
USP44-205ENST00000549639 CHMP4BP1P59074 171 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms