RNA–Protein interactions for RNA: ENST00000549076.1

ARFGAP1-222, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-222ENST00000549076 PDCD2LQ9BRP1 358 aa19.55■□□□□ 0.72
ARFGAP1-222ENST00000549076 MYL10Q9BUA6 226 aa19.55■□□□□ 0.72
ARFGAP1-222ENST00000549076 MTIF3Q9H2K0 278 aaKnown RBP19.55■□□□□ 0.72
ARFGAP1-222ENST00000549076 DDX41Q9UJV9 622 aaKnown RBP19.55■□□□□ 0.72
ARFGAP1-222ENST00000549076 STXBP5LQ9Y2K9 1186 aa19.55■□□□□ 0.72
ARFGAP1-222ENST00000549076 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 CCND2P30279 289 aa19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 CHMP4BP1P59074 171 aa19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 PTPN11Q06124 597 aaPredicted RBP19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 ARHGAP1Q07960 439 aa19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 LAMC2Q13753 1193 aa19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 VSIG10LQ86VR7 867 aa19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 CUL5Q93034 780 aa19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 NOC4LQ9BVI4 516 aaKnown RBP19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 IL23AQ9NPF7 189 aa19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 NOD1Q9Y239 953 aa19.54■□□□□ 0.72
ARFGAP1-222ENST00000549076 MMP3P08254 477 aa19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 PGM5Q15124 567 aa19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 DGKDQ16760 1214 aa19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 TMEM240Q5SV17 173 aa19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 DHX37Q8IY37 1157 aaKnown RBP19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 RPUSD2Q8IZ73 545 aaKnown RBP19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 EMID1Q96A84 441 aaPredicted RBP19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 NEK1Q96PY6 1258 aa19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 TRMT13Q9NUP7 481 aaKnown RBP19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 KIAA1217Q5T5P2 1943 aa19.53■□□□□ 0.72
ARFGAP1-222ENST00000549076 NEFLP07196 543 aa19.52■□□□□ 0.72
ARFGAP1-222ENST00000549076 ACRP10323 421 aa19.52■□□□□ 0.72
ARFGAP1-222ENST00000549076 TGFB3P10600 412 aa19.52■□□□□ 0.72
ARFGAP1-222ENST00000549076 CCL23P55773 120 aa19.52■□□□□ 0.72
ARFGAP1-222ENST00000549076 KRT32Q14532 448 aa19.52■□□□□ 0.72
ARFGAP1-222ENST00000549076 ZNF365Q70YC5 407 aa19.52■□□□□ 0.72
ARFGAP1-222ENST00000549076 SMARCC2Q8TAQ2 1214 aa19.52■□□□□ 0.72
ARFGAP1-222ENST00000549076 FAM161BQ96MY7 647 aa19.52■□□□□ 0.72
ARFGAP1-222ENST00000549076 FGBP02675 491 aa19.51■□□□□ 0.71
ARFGAP1-222ENST00000549076 GNPTABQ3T906 1256 aa19.51■□□□□ 0.71
ARFGAP1-222ENST00000549076 C16orf59Q7L2K0 433 aa19.51■□□□□ 0.71
ARFGAP1-222ENST00000549076 FANCBQ8NB91 859 aa19.51■□□□□ 0.71
ARFGAP1-222ENST00000549076 RETREG2Q8NC44 543 aa19.51■□□□□ 0.71
ARFGAP1-222ENST00000549076 KATNAL1Q9BW62 490 aa19.51■□□□□ 0.71
ARFGAP1-222ENST00000549076 LRRC2Q9BYS8 371 aa19.51■□□□□ 0.71
ARFGAP1-222ENST00000549076 SCN10AQ9Y5Y9 1956 aa19.51■□□□□ 0.71
ARFGAP1-222ENST00000549076 TMEM265A0A087WTH1 108 aa19.5■□□□□ 0.71
ARFGAP1-222ENST00000549076 STAM2O75886 525 aa19.5■□□□□ 0.71
ARFGAP1-222ENST00000549076 CYP2C9P11712 490 aa19.5■□□□□ 0.71
ARFGAP1-222ENST00000549076 BFSP2Q13515 415 aa19.5■□□□□ 0.71
ARFGAP1-222ENST00000549076 DHX32Q7L7V1 743 aaKnown RBP19.5■□□□□ 0.71
ARFGAP1-222ENST00000549076 SGMS1Q86VZ5 419 aa19.5■□□□□ 0.71
ARFGAP1-222ENST00000549076 PPTC7Q8NI37 304 aa19.5■□□□□ 0.71
ARFGAP1-222ENST00000549076 SEMA6BQ9H3T3 888 aa19.5■□□□□ 0.71
ARFGAP1-222ENST00000549076 UMODL1Q5DID0 1318 aa19.5■□□□□ 0.71
ARFGAP1-222ENST00000549076 PLEKHA8P1O95397 391 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 HMGB1P09429 215 aaKnown RBP19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 RXRAP19793 462 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 TSGA10IPQ3SY00 556 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 MICU3Q86XE3 530 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 SRBD1Q8N5C6 995 aaKnown RBP19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 CCDC155Q8N6L0 562 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 SLC17A8Q8NDX2 589 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 HERVK_113Q902F9 699 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 SPATA33Q96N06 139 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 WNT8AQ9H1J5 351 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 MLXIPQ9HAP2 919 aa19.49■□□□□ 0.71
ARFGAP1-222ENST00000549076 COL6A3P12111 3177 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 PIK3CDO00329 1044 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 PPFIA4O75335 1185 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 GGPS1O95749 300 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 PFKMP08237 780 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 FGD1P98174 961 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 PTGISQ16647 500 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 CELF3Q5SZQ8 465 aaKnown RBP19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 MYSM1Q5VVJ2 828 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 XRRA1Q6P2D8 792 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 C7orf31Q8N865 590 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 IL31RAQ8NI17 732 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 GUCD1Q96NT3 240 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 PSTPIP2Q9H939 334 aa19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 RBM28Q9NW13 759 aaKnown RBP19.48■□□□□ 0.71
ARFGAP1-222ENST00000549076 PITPNM1O00562 1244 aa19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 RGS20O76081 388 aa19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 DNAJB2P25686 324 aa19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 RFC2P35250 354 aa19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 RASIP1Q5U651 963 aa19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 TMTC3Q6ZXV5 915 aa19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 SESTD1Q86VW0 696 aa19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 RAB11FIP4Q86YS3 637 aa19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 CMTR1Q8N1G2 835 aaKnown RBP19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 CCDC82Q8N4S0 544 aa19.47■□□□□ 0.71
ARFGAP1-222ENST00000549076 ZBTB43O43298 467 aa19.46■□□□□ 0.71
ARFGAP1-222ENST00000549076 ACTN1P12814 892 aa19.46■□□□□ 0.71
ARFGAP1-222ENST00000549076 UBA1P22314 1058 aaKnown RBP19.46■□□□□ 0.71
ARFGAP1-222ENST00000549076 PSEN2P49810 448 aa19.46■□□□□ 0.71
ARFGAP1-222ENST00000549076 EXOSC10Q01780 885 aaKnown RBP19.46■□□□□ 0.71
ARFGAP1-222ENST00000549076 NEDD9Q14511 834 aa19.46■□□□□ 0.71
ARFGAP1-222ENST00000549076 MFSD10Q14728 455 aa19.46■□□□□ 0.71
ARFGAP1-222ENST00000549076 USP17L6PQ6QN14 398 aa19.46■□□□□ 0.71
ARFGAP1-222ENST00000549076 OTOP2Q7RTS6 562 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms