RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MEIS2O14770 477 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 ADAMTS3O15072 1205 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 SEPT4O43236 478 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 MYCNP04198 464 aaPredicted RBP19.85■□□□□ 0.77
HDAC7-227ENST00000548080 U2AF2P26368 475 aaKnown RBP eCLIP19.85■□□□□ 0.77
HDAC7-227ENST00000548080 PDE4DQ08499 809 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 TMEM63BQ5T3F8 832 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 ARHGEF16Q5VV41 709 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 ATL3Q6DD88 541 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 DNERQ8NFT8 737 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 ZNF396Q96N95 335 aaPredicted RBP19.85■□□□□ 0.77
HDAC7-227ENST00000548080 PSTPIP2Q9H939 334 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 PXMP2Q9NR77 195 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 BARHL2Q9NY43 387 aa19.85■□□□□ 0.77
HDAC7-227ENST00000548080 PRPF40AO75400 957 aaKnown RBP19.84■□□□□ 0.77
HDAC7-227ENST00000548080 GHRHRQ02643 423 aa19.84■□□□□ 0.77
HDAC7-227ENST00000548080 TCHHQ07283 1943 aa19.84■□□□□ 0.77
HDAC7-227ENST00000548080 CSPP1Q1MSJ5 1256 aa19.84■□□□□ 0.77
HDAC7-227ENST00000548080 CCDC144BQ3MJ40 725 aa19.84■□□□□ 0.77
HDAC7-227ENST00000548080 DIS3L2Q8IYB7 885 aaKnown RBP19.84■□□□□ 0.77
HDAC7-227ENST00000548080 FAM177A1Q8N128 213 aaPredicted RBP19.84■□□□□ 0.77
HDAC7-227ENST00000548080 NSUN6Q8TEA1 469 aaKnown RBP19.84■□□□□ 0.77
HDAC7-227ENST00000548080 CUL5Q93034 780 aa19.84■□□□□ 0.77
HDAC7-227ENST00000548080 PGBD1Q96JS3 809 aa19.84■□□□□ 0.77
HDAC7-227ENST00000548080 FOXP1Q9H334 677 aaPredicted RBP19.84■□□□□ 0.77
HDAC7-227ENST00000548080 ABHD16BQ9H3Z7 469 aa19.84■□□□□ 0.77
HDAC7-227ENST00000548080 LMBRD1Q9NUN5 540 aa19.84■□□□□ 0.77
HDAC7-227ENST00000548080 MYCLP12524 364 aaPredicted RBP19.83■□□□□ 0.76
HDAC7-227ENST00000548080 ADCYAP1R1P41586 468 aa19.83■□□□□ 0.76
HDAC7-227ENST00000548080 NLRP5P59047 1200 aa19.83■□□□□ 0.76
HDAC7-227ENST00000548080 IRX5P78411 483 aaPredicted RBP19.83■□□□□ 0.76
HDAC7-227ENST00000548080 GJC2Q5T442 439 aaPredicted RBP19.83■□□□□ 0.76
HDAC7-227ENST00000548080 TMEM87AQ8NBN3 555 aa19.83■□□□□ 0.76
HDAC7-227ENST00000548080 MORC4Q8TE76 937 aa19.83■□□□□ 0.76
HDAC7-227ENST00000548080 DIS3LQ8TF46 1054 aaKnown RBP19.83■□□□□ 0.76
HDAC7-227ENST00000548080 BRMS1Q9HCU9 246 aa19.83■□□□□ 0.76
HDAC7-227ENST00000548080 TFIP11Q9UBB9 837 aaKnown RBP19.83■□□□□ 0.76
HDAC7-227ENST00000548080 CFAP45Q9UL16 551 aa19.83■□□□□ 0.76
HDAC7-227ENST00000548080 SMCO2A6NFE2 343 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 BTBD18B2RXH4 712 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 hCG_1984214I3L0E3 225 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 FIBPO43427 364 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 AKR1A1P14550 325 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 EDNRBP24530 442 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 KRT2P35908 639 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 ADCY7P51828 1080 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 MYSM1Q5VVJ2 828 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 TAPT1Q6NXT6 567 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 ZNF713Q8N859 430 aaPredicted RBP19.82■□□□□ 0.76
HDAC7-227ENST00000548080 CCDC148Q8NFR7 591 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 PDCD2LQ9BRP1 358 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 SCAND2PQ9GZW5 306 aaPredicted RBP19.82■□□□□ 0.76
HDAC7-227ENST00000548080 CRISPLD2Q9H0B8 497 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 GDPD2Q9HCC8 539 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 TMEM260Q9NX78 707 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 NRBP1Q9UHY1 535 aa19.82■□□□□ 0.76
HDAC7-227ENST00000548080 PGK1P00558 417 aa19.81■□□□□ 0.76
HDAC7-227ENST00000548080 NR3C2P08235 984 aa19.81■□□□□ 0.76
HDAC7-227ENST00000548080 PGM5Q15124 567 aa19.81■□□□□ 0.76
HDAC7-227ENST00000548080 PPP1R18Q6NYC8 613 aa19.81■□□□□ 0.76
HDAC7-227ENST00000548080 NOSTRINQ8IVI9 506 aa19.81■□□□□ 0.76
HDAC7-227ENST00000548080 RIC8AQ9NPQ8 531 aa19.81■□□□□ 0.76
HDAC7-227ENST00000548080 FAM184BQ9ULE4 1060 aa19.81■□□□□ 0.76
HDAC7-227ENST00000548080 SKOR2Q2VWA4 1001 aaPredicted RBP19.8■□□□□ 0.76
HDAC7-227ENST00000548080 OXER1Q8TDS5 423 aa19.8■□□□□ 0.76
HDAC7-227ENST00000548080 CCDC12Q8WUD4 166 aaPredicted RBP19.8■□□□□ 0.76
HDAC7-227ENST00000548080 MAF1Q9H063 256 aa19.8■□□□□ 0.76
HDAC7-227ENST00000548080 VTA1Q9NP79 307 aa19.8■□□□□ 0.76
HDAC7-227ENST00000548080 MAP3K20Q9NYL2 800 aaKnown RBP19.8■□□□□ 0.76
HDAC7-227ENST00000548080 OGDHLQ9ULD0 1010 aa19.8■□□□□ 0.76
HDAC7-227ENST00000548080 KIAA1217Q5T5P2 1943 aa19.8■□□□□ 0.76
HDAC7-227ENST00000548080 MYH15Q9Y2K3 1946 aa19.8■□□□□ 0.76
HDAC7-227ENST00000548080 PIK3CDO00329 1044 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 RARBP10826 455 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 NPY5RQ15761 445 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 GALNT17Q6IS24 598 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 SEPT14Q6ZU15 432 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 SAMD3Q8N6K7 520 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 RASGRP4Q8TDF6 673 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 SPATA32Q96LK8 384 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 MPHOSPH6Q99547 160 aaKnown RBP19.79■□□□□ 0.76
HDAC7-227ENST00000548080 XPNPEP3Q9NQH7 507 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 MKI67P46013 3256 aaKnown RBP19.79■□□□□ 0.76
HDAC7-227ENST00000548080 TRAK2O60296 914 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 FARP2O94887 1054 aaPredicted RBP19.79■□□□□ 0.76
HDAC7-227ENST00000548080 SMPD1P17405 629 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 MNX1P50219 401 aaPredicted RBP19.79■□□□□ 0.76
HDAC7-227ENST00000548080 TNFAIP2Q03169 654 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 NR5A1Q13285 461 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 STXBP2Q15833 593 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 JAKMIP3Q5VZ66 844 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 LEO1Q8WVC0 666 aaPredicted RBP19.79■□□□□ 0.76
HDAC7-227ENST00000548080 USP28Q96RU2 1077 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 PCDHA6Q9UN73 950 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 PCDHA8Q9Y5H6 950 aa19.79■□□□□ 0.76
HDAC7-227ENST00000548080 SYNRGQ9UMZ2 1314 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 MYADML2A6NDP7 307 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 MSCO60682 206 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 ARIH2O95376 493 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 CCND2P30279 289 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms