RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 IFT88Q13099 833 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 TXNRD1Q16881 649 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 CENPPQ6IPU0 288 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 PDXDC1Q6P996 788 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 BAP1Q92560 729 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 HPS3Q969F9 1004 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 CD248Q9HCU0 757 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 SLC39A2Q9NP94 309 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 SLIT2O94813 1529 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 SRRM3A6NNA2 597 aaPredicted RBP15.68■□□□□ 0.1
SRP54-202ENST00000546080 SMTNP53814 917 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 ITGB3BPQ13352 177 aaPredicted RBP15.68■□□□□ 0.1
SRP54-202ENST00000546080 ASTE1Q2TB18 679 aaPredicted RBP15.68■□□□□ 0.1
SRP54-202ENST00000546080 CCDC40Q4G0X9 1142 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 CEP85LQ5SZL2 805 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 SUSD4Q5VX71 490 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 CCDC13Q8IYE1 715 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 ARFGAP2Q8N6H7 521 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 KLC4Q9NSK0 619 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 PLAAQ9Y263 795 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 CASZ1Q86V15 1759 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 BAZ2BQ9UIF8 2168 aaKnown RBP15.68■□□□□ 0.1
SRP54-202ENST00000546080 CACNA1SQ13698 1873 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 ABCB11O95342 1321 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 PALMO75781 387 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 OR52Z1P0C646 297 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 GYG1P46976 350 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 DRP2Q13474 957 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 PPP4R3AQ6IN85 833 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 TMC4Q7Z404 712 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 DAGLBQ8NCG7 672 aa15.68■□□□□ 0.1
SRP54-202ENST00000546080 TACO1Q9BSH4 297 aaKnown RBP15.68■□□□□ 0.1
SRP54-202ENST00000546080 LUC7LQ9NQ29 371 aaKnown RBP15.68■□□□□ 0.1
SRP54-202ENST00000546080 MYH10P35580 1976 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 MYH1P12882 1939 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 ZNF804BA4D1E1 1349 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 ZPR1O75312 459 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 FTCDO95954 541 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 HPDP32754 393 aaPredicted RBP15.67■□□□□ 0.1
SRP54-202ENST00000546080 ATP2B2Q01814 1243 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 GALNT17Q6IS24 598 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 HEATR3Q7Z4Q2 680 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 GIMAP7Q8NHV1 300 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 ZKSCAN4Q969J2 545 aaPredicted RBP15.67■□□□□ 0.1
SRP54-202ENST00000546080 PPANQ9NQ55 473 aaKnown RBP15.67■□□□□ 0.1
SRP54-202ENST00000546080 A0A1B0GUL6 1792 aa15.67■□□□□ 0.1
SRP54-202ENST00000546080 COL1A1P02452 1464 aaPredicted RBP15.67■□□□□ 0.1
SRP54-202ENST00000546080 CDR1P51861 262 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 TNNC1P63316 161 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 SLC9C1Q4G0N8 1177 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 CCDC121Q6ZUS5 278 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 STAG2Q8N3U4 1231 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 CYFIP2Q96F07 1278 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 CENPHQ9H3R5 247 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 TMBIM4Q9HC24 238 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 RBAK-RBAKDNI3L0D1 243 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 HSPA9P38646 679 aaKnown RBP15.66■□□□□ 0.1
SRP54-202ENST00000546080 CDC37Q16543 378 aaPredicted RBP15.66■□□□□ 0.1
SRP54-202ENST00000546080 HGSNATQ68CP4 663 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 RCSD1Q6JBY9 416 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 CALML4Q96GE6 196 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 EDEM3Q9BZQ6 932 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 TANGO6Q9C0B7 1094 aa15.66■□□□□ 0.1
SRP54-202ENST00000546080 ACTR5Q9H9F9 607 aaPredicted RBP15.66■□□□□ 0.1
SRP54-202ENST00000546080 GOLGA6L7A0A1B0GV03 622 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 GCOM1H8Y6P7 765 aaPredicted RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 RAD51CO43502 376 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 CCNT1O60563 726 aaKnown RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 RASSF9O75901 435 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 MYZAPP0CAP1 466 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 IL6STP40189 918 aaPredicted RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 NEDD9Q14511 834 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 HLTFQ14527 1009 aaKnown RBP eCLIP15.65■□□□□ 0.1
SRP54-202ENST00000546080 LRIG3Q6UXM1 1119 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 SLC4A9Q96Q91 983 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 CRNKL1Q9BZJ0 848 aaKnown RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 TAF1DQ9H5J8 278 aaPredicted RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 SLC40A1Q9NP59 571 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 DCP1AQ9NPI6 582 aaPredicted RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 PLCB1Q9NQ66 1216 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 LAMB1P07942 1786 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 CYP2D6P10635 497 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 TECP42680 631 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 GNAQP50148 359 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 MMP14P50281 582 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 RNASE9P60153 205 aaKnown RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 LETM2Q2VYF4 491 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 MEI1Q5TIA1 1274 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 C6orf89Q6UWU4 347 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 PAXIP1Q6ZW49 1069 aaPredicted RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 SV2BQ7L1I2 683 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 PNMA1Q8ND90 353 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.65■□□□□ 0.1
SRP54-202ENST00000546080 CCDC114Q96M63 670 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 INPP4AQ96PE3 977 aaPredicted RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 NUCKS1Q9H1E3 243 aaKnown RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 NLRC4Q9NPP4 1024 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 DONSONQ9NYP3 566 aa15.65■□□□□ 0.1
SRP54-202ENST00000546080 ARPP21Q9UBL0 812 aaPredicted RBP15.65■□□□□ 0.1
SRP54-202ENST00000546080 DCCP43146 1447 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms