RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 WDR19Q8NEZ3 1342 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 SYNGAP1Q96PV0 1343 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 SMCHD1A6NHR9 2005 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 TNRC18O15417 2968 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-224ENST00000544990 MCM5P33992 734 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 PDE4CQ08493 712 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 TMEM67Q5HYA8 995 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 PRAMEF19Q5SWL8 479 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 MAMDC4Q6UXC1 1216 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 NSMFQ6X4W1 530 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 STOX1Q6ZVD7 989 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 CHST3Q7LGC8 479 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 UBE2Q1Q7Z7E8 422 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 CATIPQ7Z7H3 387 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 ZBTB33Q86T24 672 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 MB21D2Q8IYB1 491 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-224ENST00000544990 ARRDC4Q8NCT1 418 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 ADAMTS19Q8TE59 1207 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 DPF3Q92784 378 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 PAWRQ96IZ0 340 aaKnown RBP8.58□□□□□ -1.04
CPSF7-224ENST00000544990 TMEM87BQ96K49 555 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 ARHGAP9Q9BRR9 750 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 PPP1R12CQ9BZL4 782 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 UBA5Q9GZZ9 404 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 A1CFQ9NQ94 594 aaKnown RBP8.58□□□□□ -1.04
CPSF7-224ENST00000544990 TAF6LQ9Y6J9 622 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 FRMPD3Q5JV73 1810 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 CENPFP49454 3210 aa8.58□□□□□ -1.04
CPSF7-224ENST00000544990 ASB14A6NK59 587 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 KLRF2D3W0D1 207 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 PRC1O43663 620 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 REC8O95072 547 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 S1PR4O95977 384 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 RARBP10826 455 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 AKR1A1P14550 325 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 RFX1P22670 979 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 TRAF1Q13077 416 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 KRT32Q14532 448 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 CDC37Q16543 378 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-224ENST00000544990 MUM1L1Q5H9M0 696 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 ADGRF4Q8IZF3 695 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 FAM133AQ8N9E0 248 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 TRPV1Q8NER1 839 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 IGDCC4Q8TDY8 1250 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-224ENST00000544990 MPHOSPH6Q99547 160 aaKnown RBP8.57□□□□□ -1.04
CPSF7-224ENST00000544990 MAF1Q9H063 256 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 ABHD16BQ9H3Z7 469 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 C11orf49Q9H6J7 331 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 VAT1LQ9HCJ6 419 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 CYP39A1Q9NYL5 469 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 ADD3Q9UEY8 706 aaKnown RBP8.57□□□□□ -1.04
CPSF7-224ENST00000544990 NR2E3Q9Y5X4 410 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 MCM3APO60318 1980 aa8.57□□□□□ -1.04
CPSF7-224ENST00000544990 ABCB11O95342 1321 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 LOC102724159A0A0B4J2E5 919 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 PTPDC1A2A3K4 754 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 PALM3A6NDB9 673 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 CCDC69A6NI79 296 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 B4DLN1 442 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 KBTBD13C9JR72 458 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 ZBTB24O43167 697 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 MRPL12P52815 198 aaKnown RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 ANTXR2P58335 489 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 CNTN2Q02246 1040 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 ACVR2BQ13705 512 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 BAATQ14032 418 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 GRM4Q14833 912 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 AGERQ15109 404 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 PWP2Q15269 919 aaKnown RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 TSGA10IPQ3SY00 556 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 USH1GQ495M9 461 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 RNF207Q6ZRF8 634 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 ARMCX2Q7L311 632 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 FBXO11Q86XK2 927 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 CCDC144CPQ8IYA2 1237 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 STAG2Q8N3U4 1231 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 CTCFLQ8NI51 663 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 DIS3LQ8TF46 1054 aaKnown RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 NUP133Q8WUM0 1156 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 PBXIP1Q96AQ6 731 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 NEK1Q96PY6 1258 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 MAP3K14Q99558 947 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 CPVLQ9H3G5 476 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 JMJD4Q9H9V9 463 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 TFIP11Q9UBB9 837 aaKnown RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 MAD2L2Q9UI95 211 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 ZHX1Q9UKY1 873 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 FAM184BQ9ULE4 1060 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 MRPL11Q9Y3B7 192 aaKnown RBP8.56□□□□□ -1.04
CPSF7-224ENST00000544990 PCDHB9Q9Y5E1 797 aa8.56□□□□□ -1.04
CPSF7-224ENST00000544990 DNM1LO00429 736 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 NFIBO00712 420 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 DDAH1O94760 285 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 SNAI1O95863 264 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-224ENST00000544990 HMGB1P09429 215 aaKnown RBP8.55□□□□□ -1.04
CPSF7-224ENST00000544990 ZNF865P0CJ78 1059 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-224ENST00000544990 CALM1P0DP23 149 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 CALM2P0DP24 149 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms