RNA–Protein interactions for RNA: ENST00000544683.5

CLPB-214, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-214ENST00000544683 CHST3Q7LGC8 479 aa10.57□□□□□ -0.72
CLPB-214ENST00000544683 SESTD1Q86VW0 696 aa10.57□□□□□ -0.72
CLPB-214ENST00000544683 RPUSD2Q8IZ73 545 aaKnown RBP10.57□□□□□ -0.72
CLPB-214ENST00000544683 AFG1LQ8WV93 481 aa10.57□□□□□ -0.72
CLPB-214ENST00000544683 KAT2BQ92831 832 aa10.57□□□□□ -0.72
CLPB-214ENST00000544683 SCLYQ96I15 445 aa10.57□□□□□ -0.72
CLPB-214ENST00000544683 PDCD2LQ9BRP1 358 aa10.57□□□□□ -0.72
CLPB-214ENST00000544683 PBX4Q9BYU1 374 aa10.57□□□□□ -0.72
CLPB-214ENST00000544683 LSG1Q9H089 658 aaKnown RBP10.57□□□□□ -0.72
CLPB-214ENST00000544683 ZNF576Q9H609 170 aa10.57□□□□□ -0.72
CLPB-214ENST00000544683 PITPNM1O00562 1244 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 PFKMP08237 780 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 HOXD8P13378 290 aaPredicted RBP10.56□□□□□ -0.72
CLPB-214ENST00000544683 SMARCA1P28370 1054 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 PBX2P40425 430 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 GRIN2CQ14957 1233 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 PGM5Q15124 567 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 FAM47CQ5HY64 1035 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 OTOP2Q7RTS6 562 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 CATIPQ7Z7H3 387 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 VSIG10LQ86VR7 867 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 MAFAQ8NHW3 353 aaPredicted RBP10.56□□□□□ -0.72
CLPB-214ENST00000544683 TIFAQ96CG3 184 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 CTAGE1Q96RT6 745 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 MTIF3Q9H2K0 278 aaKnown RBP10.56□□□□□ -0.72
CLPB-214ENST00000544683 LY9Q9HBG7 655 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 FRMPD4Q14CM0 1322 aa10.56□□□□□ -0.72
CLPB-214ENST00000544683 GCOM1H8Y6P7 765 aaPredicted RBP10.55□□□□□ -0.72
CLPB-214ENST00000544683 HAS3O00219 553 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 DDAH1O94760 285 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 IQCF3P0C7M6 154 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 POLR2MP0CAP2 368 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 FOSL2P15408 326 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 CASTP20810 708 aaKnown RBP10.55□□□□□ -0.72
CLPB-214ENST00000544683 HOXA13P31271 388 aaPredicted RBP10.55□□□□□ -0.72
CLPB-214ENST00000544683 RFC2P35250 354 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 NECTIN1Q15223 517 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 RAB30Q15771 203 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 DGKDQ16760 1214 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 KCNV1Q6PIU1 500 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLPB-214ENST00000544683 ZNF654Q8IZM8 581 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 IL31RAQ8NI17 732 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 PPTC7Q8NI37 304 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 PPP1R13LQ8WUF5 828 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 ESYT1Q9BSJ8 1104 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 MRVI1Q9Y6F6 885 aa10.55□□□□□ -0.72
CLPB-214ENST00000544683 SLC27A2O14975 620 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 PRC1O43663 620 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 F2P00734 622 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 TGFB3P10600 412 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 MYCLP12524 364 aaPredicted RBP10.54□□□□□ -0.72
CLPB-214ENST00000544683 MCM5P33992 734 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 SP2Q02086 613 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 RBL2Q08999 1139 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 BFSP2Q13515 415 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
CLPB-214ENST00000544683 PTGISQ16647 500 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 BMP2KLQ5H9B9 411 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 CELF3Q5SZQ8 465 aaKnown RBP10.54□□□□□ -0.72
CLPB-214ENST00000544683 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 GDF6Q6KF10 455 aaPredicted RBP10.54□□□□□ -0.72
CLPB-214ENST00000544683 MICAL3Q7RTP6 2002 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 DHX37Q8IY37 1157 aaKnown RBP10.54□□□□□ -0.72
CLPB-214ENST00000544683 TMTC2Q8N394 836 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 TMEM87BQ96K49 555 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 MSRAQ9UJ68 235 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 YBX2Q9Y2T7 364 aaKnown RBP10.54□□□□□ -0.72
CLPB-214ENST00000544683 SLC4A7Q9Y6M7 1214 aa10.54□□□□□ -0.72
CLPB-214ENST00000544683 SH2B2O14492 632 aaPredicted RBP10.53□□□□□ -0.72
CLPB-214ENST00000544683 PPFIA4O75335 1185 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 CCND2P30279 289 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 KIF5BP33176 963 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 LIFRP42702 1097 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 PSEN2P49810 448 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 MRPS9P82933 396 aaKnown RBP10.53□□□□□ -0.72
CLPB-214ENST00000544683 HSDL1Q3SXM5 330 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 CREB3L3Q68CJ9 461 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 CASC1Q6TDU7 716 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 DEFB128Q7Z7B8 93 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 FCHSD1Q86WN1 690 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 RETREG2Q8NC44 543 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 CTCFLQ8NI51 663 aaPredicted RBP10.53□□□□□ -0.72
CLPB-214ENST00000544683 CAGE1Q8TC20 777 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 DHX38Q92620 1227 aaKnown RBP10.53□□□□□ -0.72
CLPB-214ENST00000544683 LZTS2Q9BRK4 669 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 MYL10Q9BUA6 226 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 KATNAL1Q9BW62 490 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 GTF2IRD1Q9UHL9 959 aa10.53□□□□□ -0.72
CLPB-214ENST00000544683 PIK3CDO00329 1044 aa10.52□□□□□ -0.73
CLPB-214ENST00000544683 MEIS2O14770 477 aa10.52□□□□□ -0.73
CLPB-214ENST00000544683 STAM2O75886 525 aa10.52□□□□□ -0.73
CLPB-214ENST00000544683 GGPS1O95749 300 aa10.52□□□□□ -0.73
CLPB-214ENST00000544683 ACTN1P12814 892 aa10.52□□□□□ -0.73
CLPB-214ENST00000544683 UBA1P22314 1058 aaKnown RBP10.52□□□□□ -0.73
CLPB-214ENST00000544683 ICAM3P32942 547 aa10.52□□□□□ -0.73
CLPB-214ENST00000544683 GNAQP50148 359 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms