RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 ACTN1P12814 892 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 POU3F3P20264 500 aaPredicted RBP16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 IGFBP4P22692 258 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 HSD17B4P51659 736 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 GPNMBQ14956 572 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 PTGISQ16647 500 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 TMEM67Q5HYA8 995 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 STAG2Q8N3U4 1231 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 SLC9A7Q96T83 725 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 UBAC1Q9BSL1 405 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 PXMP2Q9NR77 195 aa16.18■□□□□ 0.18
SEMA4D-224ENST00000544513 MYH6P13533 1939 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 TRIP12Q14669 1992 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 PALM3A6NDB9 673 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 PPP1R11O60927 126 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 CA3P07451 260 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 NR3C2P08235 984 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 HOXD8P13378 290 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 CASTP20810 708 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 RBL2Q08999 1139 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 CCDC85BQ15834 202 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 DGKDQ16760 1214 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 ARHGEF16Q5VV41 709 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 GDF6Q6KF10 455 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 STOX1Q6ZVD7 989 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 CAGE1Q8TC20 777 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 AFAP1L1Q8TED9 768 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 DHX38Q92620 1227 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 AMNQ9BXJ7 453 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 VAT1LQ9HCJ6 419 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 MAD2L2Q9UI95 211 aa16.17■□□□□ 0.18
SEMA4D-224ENST00000544513 KLRF2D3W0D1 207 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 DHX16O60231 1041 aaKnown RBP16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 RGS20O76081 388 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 BAIAP3O94812 1187 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 EIF2AK2P19525 551 aaKnown RBP16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 MRPS5P82675 430 aaKnown RBP16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 LAMC2Q13753 1193 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 SLC35G1Q2M3R5 365 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 CYB5R4Q7L1T6 521 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 HERC6Q8IVU3 1022 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 SAMD3Q8N6K7 520 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 PPTC7Q8NI37 304 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 MAP3K20Q9NYL2 800 aaKnown RBP16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 GTF2IRD1Q9UHL9 959 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 NOD1Q9Y239 953 aa16.16■□□□□ 0.18
SEMA4D-224ENST00000544513 HAS3O00219 553 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 TNFRSF10AO00220 468 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 ZBTB5O15062 677 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 F2P00734 622 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 CFBP00751 764 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 CXCL10P02778 98 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 SELPP16109 830 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 PDE4AP27815 886 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 TAP1Q03518 808 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 CHST3Q7LGC8 479 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 CCDC155Q8N6L0 562 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 PDCD2LQ9BRP1 358 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 FTOQ9C0B1 505 aaKnown RBP eCLIP16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 MTCH2Q9Y6C9 303 aa16.15■□□□□ 0.18
SEMA4D-224ENST00000544513 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 ARHGEF15O94989 841 aa16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 GSPT1P15170 499 aaKnown RBP16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 CHMP4BP1P59074 171 aa16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 MYSM1Q5VVJ2 828 aa16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 VSIG10LQ86VR7 867 aa16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 RIOX1Q9H6W3 641 aa16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 HDAC6Q9UBN7 1215 aa16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 PCDHA1Q9Y5I3 950 aa16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 MRVI1Q9Y6F6 885 aa16.14■□□□□ 0.17
SEMA4D-224ENST00000544513 BAZ2BQ9UIF8 2168 aaKnown RBP16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 RFXAPO00287 272 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 PPFIA4O75335 1185 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 PARNO95453 639 aaKnown RBP16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 CKBP12277 381 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 PSEN2P49810 448 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 WDR5P61964 334 aaKnown RBP16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 GRM4Q14833 912 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 TRIM71Q2Q1W2 868 aaKnown RBP16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 TTC22Q5TAA0 569 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 TRAF7Q6Q0C0 670 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 LRRC8DQ7L1W4 858 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 C7orf31Q8N865 590 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 ADAMTS19Q8TE59 1207 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 BRWD1Q9NSI6 2320 aa16.13■□□□□ 0.17
SEMA4D-224ENST00000544513 PTPRSQ13332 1948 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 KIF28PB7ZC32 967 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 NBNO60934 754 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 CYP21A2P08686 494 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 ZNF286BP0CG31 522 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 TGFB3P10600 412 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 HOXA13P31271 388 aaPredicted RBP16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 TROAPQ12815 778 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 PTK7Q13308 1070 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 MFSD10Q14728 455 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 PGM5Q15124 567 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 KIAA0753Q2KHM9 967 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 CELF3Q5SZQ8 465 aaKnown RBP16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 KCNV1Q6PIU1 500 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms