RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ANO3Q9BYT9 981 aa17.29■□□□□ 0.36
CD9-210ENST00000543916 FOSP01100 380 aaPredicted RBP17.28■□□□□ 0.36
CD9-210ENST00000543916 RARBP10826 455 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 SMPD1P17405 629 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 FOSBP53539 338 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 TNFAIP2Q03169 654 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 AP3B2Q13367 1082 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 GJC2Q5T442 439 aaPredicted RBP17.28■□□□□ 0.36
CD9-210ENST00000543916 PCNX4Q63HM2 1172 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 IQSEC1Q6DN90 963 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 FAM177A1Q8N128 213 aaPredicted RBP17.28■□□□□ 0.36
CD9-210ENST00000543916 DAGLBQ8NCG7 672 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 BICD2Q8TD16 824 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 WDR11Q9BZH6 1224 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 XPNPEP3Q9NQH7 507 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 PCDHA4Q9UN74 947 aa17.28■□□□□ 0.36
CD9-210ENST00000543916 SYNRGQ9UMZ2 1314 aa17.27■□□□□ 0.36
CD9-210ENST00000543916 DOCK5Q9H7D0 1870 aa17.27■□□□□ 0.36
CD9-210ENST00000543916 M0R2N6 131 aa17.27■□□□□ 0.36
CD9-210ENST00000543916 DUSP11O75319 330 aaKnown RBP17.27■□□□□ 0.36
CD9-210ENST00000543916 ARIH2O95376 493 aa17.27■□□□□ 0.36
CD9-210ENST00000543916 PGK1P00558 417 aa17.27■□□□□ 0.36
CD9-210ENST00000543916 MNX1P50219 401 aaPredicted RBP17.27■□□□□ 0.36
CD9-210ENST00000543916 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
CD9-210ENST00000543916 SEPT14Q6ZU15 432 aa17.27■□□□□ 0.36
CD9-210ENST00000543916 BLIDQ8IZY5 108 aa17.27■□□□□ 0.36
CD9-210ENST00000543916 SCFD2Q8WU76 684 aa17.27■□□□□ 0.36
CD9-210ENST00000543916 EHMT1Q9H9B1 1298 aa17.27■□□□□ 0.36
CD9-210ENST00000543916 GNEQ9Y223 722 aaKnown RBP17.27■□□□□ 0.36
CD9-210ENST00000543916 ADAMTS4O75173 837 aa17.26■□□□□ 0.35
CD9-210ENST00000543916 XBP1P17861 261 aa17.26■□□□□ 0.35
CD9-210ENST00000543916 SREBF1P36956 1147 aa17.26■□□□□ 0.35
CD9-210ENST00000543916 HMGN5P82970 282 aaKnown RBP17.26■□□□□ 0.35
CD9-210ENST00000543916 DUSP28Q4G0W2 176 aa17.26■□□□□ 0.35
CD9-210ENST00000543916 XRRA1Q6P2D8 792 aa17.26■□□□□ 0.35
CD9-210ENST00000543916 CCDC62Q6P9F0 684 aa17.26■□□□□ 0.35
CD9-210ENST00000543916 INPP4AQ96PE3 977 aaPredicted RBP17.26■□□□□ 0.35
CD9-210ENST00000543916 RTEL1Q9NZ71 1219 aa17.26■□□□□ 0.35
CD9-210ENST00000543916 MYADML2A6NDP7 307 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 STAM2O75886 525 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 TXNP10599 105 aaKnown RBP17.25■□□□□ 0.35
CD9-210ENST00000543916 CUL4AQ13619 759 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 LRRC41Q15345 812 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 LY6KQ17RY6 165 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 MCTP2Q6DN12 878 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 GALNT17Q6IS24 598 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 TLK2Q86UE8 772 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 OXER1Q8TDS5 423 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 DIS3LQ8TF46 1054 aaKnown RBP17.25■□□□□ 0.35
CD9-210ENST00000543916 CRYGNQ8WXF5 182 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 COPS5Q92905 334 aa17.25■□□□□ 0.35
CD9-210ENST00000543916 UPF3AQ9H1J1 476 aaKnown RBP17.25■□□□□ 0.35
CD9-210ENST00000543916 KIAA0100Q14667 2235 aaKnown RBP17.25■□□□□ 0.35
CD9-210ENST00000543916 CTAGE5O15320 804 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 ITGB5P18084 799 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 GJA9P57773 515 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 SEMA3FQ13275 785 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 TTLL4Q14679 1199 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 KRT40Q6A162 431 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 UBE2Q1Q7Z7E8 422 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 ANKLE1Q8NAG6 615 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 SNX21Q969T3 373 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 UBIAD1Q9Y5Z9 338 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
CD9-210ENST00000543916 K7ELQ4 463 aaPredicted RBP17.23■□□□□ 0.35
CD9-210ENST00000543916 DYNC1LI2O43237 492 aaPredicted RBP17.23■□□□□ 0.35
CD9-210ENST00000543916 FARP2O94887 1054 aaPredicted RBP17.23■□□□□ 0.35
CD9-210ENST00000543916 MMP1P03956 469 aa17.23■□□□□ 0.35
CD9-210ENST00000543916 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
CD9-210ENST00000543916 CAPN2P17655 700 aa17.23■□□□□ 0.35
CD9-210ENST00000543916 GUCY1B3Q02153 619 aa17.23■□□□□ 0.35
CD9-210ENST00000543916 FAM184AQ8NB25 1140 aa17.23■□□□□ 0.35
CD9-210ENST00000543916 KLHDC9Q8NEP7 349 aa17.23■□□□□ 0.35
CD9-210ENST00000543916 DDX41Q9UJV9 622 aaKnown RBP17.23■□□□□ 0.35
CD9-210ENST00000543916 SPATA31C2B4DYI2 1134 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 DNM1LO00429 736 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 NKRFO15226 690 aaKnown RBP eCLIP17.22■□□□□ 0.35
CD9-210ENST00000543916 EDIL3O43854 480 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 CYP3A4P08684 503 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 C6orf222P0C671 652 aaPredicted RBP17.22■□□□□ 0.35
CD9-210ENST00000543916 GJB2P29033 226 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 ICAM3P32942 547 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 KRT2P35908 639 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 NKX3-2P78367 333 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 BEX3Q00994 111 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 SP2Q02086 613 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 NR5A1Q13285 461 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 TRIM29Q14134 588 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 GNPTABQ3T906 1256 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 ARRDC4Q8NCT1 418 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 OR6J1Q8NGC5 347 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 CYP2W1Q8TAV3 490 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 C8orf76Q96K31 380 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 AP5M1Q9H0R1 490 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 Q9Y3F1 56 aa17.22■□□□□ 0.35
CD9-210ENST00000543916 ALPK3Q96L96 1907 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 KBTBD13C9JR72 458 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 FIBPO43427 364 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 UBA1P22314 1058 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms