RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 CCL23P55773 120 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 GNPTABQ3T906 1256 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 TMEM240Q5SV17 173 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 STOX1Q6ZVD7 989 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 FCHSD1Q86WN1 690 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 ZNF654Q8IZM8 581 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 PIBF1Q8WXW3 757 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 COPS5Q92905 334 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 MTMR8Q96EF0 704 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 ESYT1Q9BSJ8 1104 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 KATNAL1Q9BW62 490 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 MLXIPQ9HAP2 919 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 DDX41Q9UJV9 622 aaKnown RBP8.28□□□□□ -1.08
NUP43-206ENST00000543637 SLC12A7Q9Y666 1083 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 KAT6AQ92794 2004 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 GRIN2DO15399 1336 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 BAZ2BQ9UIF8 2168 aaKnown RBP8.27□□□□□ -1.09
NUP43-206ENST00000543637 ZBBXA8MT70 800 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 SLC27A2O14975 620 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 STAM2O75886 525 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 PFKMP08237 780 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 PTGS1P23219 599 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 HOXA13P31271 388 aaPredicted RBP8.27□□□□□ -1.09
NUP43-206ENST00000543637 LIFRP42702 1097 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 FGD1P98174 961 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 TROAPQ12815 778 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 PGM5Q15124 567 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 NECTIN1Q15223 517 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 RAB30Q15771 203 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 PTGISQ16647 500 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 CREB3L3Q68CJ9 461 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 CCDC62Q6P9F0 684 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 MB21D2Q8IYB1 491 aaPredicted RBP8.27□□□□□ -1.09
NUP43-206ENST00000543637 C7orf31Q8N865 590 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 AFG1LQ8WV93 481 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 HERVK_113Q902F9 699 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 CCDC136Q96JN2 1154 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 NEK1Q96PY6 1258 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 GAS2L1Q99501 681 aaPredicted RBP8.27□□□□□ -1.09
NUP43-206ENST00000543637 CDX2Q99626 313 aaPredicted RBP8.27□□□□□ -1.09
NUP43-206ENST00000543637 PDCD2LQ9BRP1 358 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 NOC4LQ9BVI4 516 aaKnown RBP8.27□□□□□ -1.09
NUP43-206ENST00000543637 FTOQ9C0B1 505 aaKnown RBP eCLIP8.27□□□□□ -1.09
NUP43-206ENST00000543637 COL20A1Q9P218 1284 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 SLC4A7Q9Y6M7 1214 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 GBF1Q92538 1859 aa8.27□□□□□ -1.09
NUP43-206ENST00000543637 KIF28PB7ZC32 967 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 PPFIA4O75335 1185 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 ARIH2O95376 493 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 PARNO95453 639 aaKnown RBP8.26□□□□□ -1.09
NUP43-206ENST00000543637 MMP3P08254 477 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 CYP2C9P11712 490 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 DNAJB2P25686 324 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 RFC2P35250 354 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 NEDD9Q14511 834 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 KRT32Q14532 448 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 BMP2KLQ5H9B9 411 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 C16orf59Q7L2K0 433 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 OTOP2Q7RTS6 562 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 DEFB128Q7Z7B8 93 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 NLRX1Q86UT6 975 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 VSIG10LQ86VR7 867 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 SCLYQ96I15 445 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 SPATA33Q96N06 139 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 ALG1Q9BT22 464 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 SPZ1Q9BXG8 430 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 LSG1Q9H089 658 aaKnown RBP8.26□□□□□ -1.09
NUP43-206ENST00000543637 ZNF576Q9H609 170 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 EHMT1Q9H9B1 1298 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 SLC28A3Q9HAS3 691 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 LY9Q9HBG7 655 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 SENP2Q9HC62 589 aa8.26□□□□□ -1.09
NUP43-206ENST00000543637 TRMT13Q9NUP7 481 aaKnown RBP8.26□□□□□ -1.09
NUP43-206ENST00000543637 SCN5AQ14524 2016 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 SCN10AQ9Y5Y9 1956 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 DLL1O00548 723 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 PITPNM1O00562 1244 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 NOP56O00567 594 aaKnown RBP8.25□□□□□ -1.09
NUP43-206ENST00000543637 PPP1R11O60927 126 aaPredicted RBP8.25□□□□□ -1.09
NUP43-206ENST00000543637 CDC45O75419 566 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 GGPS1O95749 300 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 NEFLP07196 543 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
NUP43-206ENST00000543637 FOSL2P15408 326 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 PSEN2P49810 448 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 ANTXR2P58335 489 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 GHRHRQ02643 423 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 ARHGAP1Q07960 439 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 CELF3Q5SZQ8 465 aaKnown RBP8.25□□□□□ -1.09
NUP43-206ENST00000543637 CCDC82Q8N4S0 544 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 FANCBQ8NB91 859 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 GIMAP8Q8ND71 665 aaPredicted RBP8.25□□□□□ -1.09
NUP43-206ENST00000543637 PPTC7Q8NI37 304 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 CAGE1Q8TC20 777 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 MYLIPQ8WY64 445 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 EMID1Q96A84 441 aaPredicted RBP8.25□□□□□ -1.09
NUP43-206ENST00000543637 TIFAQ96CG3 184 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 GUCD1Q96NT3 240 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 MYL10Q9BUA6 226 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 RBM28Q9NW13 759 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms