RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MAGEA1P43355 309 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 CORO7P57737 925 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 LRRC63Q05C16 580 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 SND1Q7KZF4 910 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■■■□□ 16.8
NPC1-202ENST00000540608 RRAGAQ7L523 313 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 PNMA5Q96PV4 448 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 EDEM3Q9BZQ6 932 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 GOLGA6AQ9NYA3 693 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 CCNL1Q9UK58 526 aaPredicted RBP13.63□□□□□ -0.23
NPC1-202ENST00000540608 LRRC53A6NM62 1247 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
NPC1-202ENST00000540608 ASTE1Q2TB18 679 aaPredicted RBP13.63□□□□□ -0.23
NPC1-202ENST00000540608 BAP1Q92560 729 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 DRC1Q96MC2 740 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 SEC63Q9UGP8 760 aaKnown RBP13.63□□□□□ -0.23
NPC1-202ENST00000540608 SAP30BPQ9UHR5 308 aaKnown RBP13.63□□□□□ -0.23
NPC1-202ENST00000540608 BTAF1O14981 1849 aa13.63□□□□□ -0.23
NPC1-202ENST00000540608 ESYT2A0FGR8 921 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 DNAJC21Q5F1R6 531 aaKnown RBP13.62□□□□□ -0.23
NPC1-202ENST00000540608 NFRKBQ6P4R8 1299 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 FOXR2Q6PJQ5 311 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 USP17L2Q6R6M4 530 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.62□□□□□ -0.23
NPC1-202ENST00000540608 NEDD1Q8NHV4 660 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 LARP4BQ92615 738 aaKnown RBP13.62□□□□□ -0.23
NPC1-202ENST00000540608 C8orf37Q96NL8 207 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 EYA3Q99504 573 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 SH3GL2Q99962 352 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 HINFPQ9BQA5 517 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
NPC1-202ENST00000540608 GOLGA8KD6RF30 607 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 LDHCP07864 332 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 PAFAH1B1P43034 410 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 PSMD2Q13200 908 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
NPC1-202ENST00000540608 CALCRLQ16602 461 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 CCDC181Q5TID7 509 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 ARHGAP27Q6ZUM4 889 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 MAPKAPK5Q8IW41 473 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 REXO1Q8N1G1 1221 aaKnown RBP13.62□□□□□ -0.23
NPC1-202ENST00000540608 RNF10Q8N5U6 811 aaKnown RBP13.62□□□□□ -0.23
NPC1-202ENST00000540608 CCDC155Q8N6L0 562 aa13.62□□□□□ -0.23
NPC1-202ENST00000540608 SSU72P8A0A1W2PR75 194 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 TNFRSF8P28908 595 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 CDK8P49336 464 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 IRAK1P51617 712 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 EPHB4P54760 987 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 PPFIA1Q13136 1202 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 GRAPQ13588 217 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 PDIA5Q14554 519 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 ALS2CLQ60I27 953 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 PDXDC1Q6P996 788 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 EMBQ6PCB8 327 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
NPC1-202ENST00000540608 PIGSQ96S52 555 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 PLEKHA4Q9H4M7 779 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 VAT1LQ9HCJ6 419 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 OPA1O60313 960 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 MATR3P43243 847 aaKnown RBP eCLIP13.61□□□□□ -0.23
NPC1-202ENST00000540608 SLC7A5Q01650 507 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 VPS72Q15906 364 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 GLE1Q53GS7 698 aaKnown RBP13.61□□□□□ -0.23
NPC1-202ENST00000540608 LRRC55Q6ZSA7 311 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 DYMQ7RTS9 669 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 LRRC27Q9C0I9 530 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 RIC8AQ9NPQ8 531 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 STIM2Q9P246 746 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 SALL4Q9UJQ4 1053 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 LEMD3Q9Y2U8 911 aa13.61□□□□□ -0.23
NPC1-202ENST00000540608 VGLL3A8MV65 326 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 EPB41P11171 864 aaKnown RBP13.6□□□□□ -0.23
NPC1-202ENST00000540608 CXCR5P32302 372 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 TMEM266Q2M3C6 531 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 HAUS3Q68CZ6 603 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 GBP6Q6ZN66 633 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 RAD54LQ92698 747 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 CAVIN3Q969G5 261 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 NGLY1Q96IV0 654 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 NOX5Q96PH1 765 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 TLR10Q9BXR5 811 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 EFCC1Q9HA90 598 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 TMEM260Q9NX78 707 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 RNF14Q9UBS8 474 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 TSKSQ9UJT2 592 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 NAV1Q8NEY1 1877 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 RBAK-RBAKDNI3L0D1 243 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 RASSF7Q02833 373 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 GFPT1Q06210 699 aaPredicted RBP13.6□□□□□ -0.23
NPC1-202ENST00000540608 EHHADHQ08426 723 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 KLHDC7AQ5VTJ3 777 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 HGSNATQ68CP4 663 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 CACNA2D4Q7Z3S7 1137 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 CERS3Q8IU89 383 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 PROM2Q8N271 834 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 TSG101Q99816 390 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 RTFDC1Q9BY42 306 aaPredicted RBP13.6□□□□□ -0.23
NPC1-202ENST00000540608 RAB34Q9BZG1 259 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms