RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 HIPK3Q9H422 1215 aa10.44□□□□□ -0.74
LMO3-222ENST00000540445 LY9Q9HBG7 655 aa10.44□□□□□ -0.74
LMO3-222ENST00000540445 PXMP2Q9NR77 195 aa10.44□□□□□ -0.74
LMO3-222ENST00000540445 REV3LO60673 3130 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 UMODL1Q5DID0 1318 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 TMEM265A0A087WTH1 108 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.43□□□□□ -0.74
LMO3-222ENST00000540445 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.43□□□□□ -0.74
LMO3-222ENST00000540445 A6NJR5 290 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 GCOM1H8Y6P7 765 aaPredicted RBP10.43□□□□□ -0.74
LMO3-222ENST00000540445 CYTH3O43739 400 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 ARIH2O95376 493 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 GH1P01241 217 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 POLR2MP0CAP2 368 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 HSD17B4P51659 736 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 CCL23P55773 120 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 NECTIN1Q15223 517 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 NBPF20Q3BBV1 942 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 SYNE3Q6ZMZ3 975 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 AFG1LQ8WV93 481 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 VWCEQ96DN2 955 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 RRP36Q96EU6 259 aaKnown RBP10.43□□□□□ -0.74
LMO3-222ENST00000540445 TMEM87BQ96K49 555 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 CDX2Q99626 313 aaPredicted RBP10.43□□□□□ -0.74
LMO3-222ENST00000540445 MTA3Q9BTC8 594 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 ALDH8A1Q9H2A2 487 aaPredicted RBP10.43□□□□□ -0.74
LMO3-222ENST00000540445 SEC63Q9UGP8 760 aaKnown RBP10.43□□□□□ -0.74
LMO3-222ENST00000540445 MRVI1Q9Y6F6 885 aa10.43□□□□□ -0.74
LMO3-222ENST00000540445 OPLAHO14841 1288 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 DDAH1O94760 285 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 CALM1P0DP23 149 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 CALM2P0DP24 149 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 CALM3P0DP25 149 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 CASTP20810 708 aaKnown RBP10.42□□□□□ -0.74
LMO3-222ENST00000540445 GNAQP50148 359 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 GHRHRQ02643 423 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 CCDC62Q6P9F0 684 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 ZNF365Q70YC5 407 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 DHX37Q8IY37 1157 aaKnown RBP10.42□□□□□ -0.74
LMO3-222ENST00000540445 RPUSD2Q8IZ73 545 aaKnown RBP10.42□□□□□ -0.74
LMO3-222ENST00000540445 CCDC82Q8N4S0 544 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 PPP1R13LQ8WUF5 828 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 CUL5Q93034 780 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 ZFP91Q96JP5 570 aaPredicted RBP10.42□□□□□ -0.74
LMO3-222ENST00000540445 MAP3K14Q99558 947 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 LZTS2Q9BRK4 669 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 NOC4LQ9BVI4 516 aaKnown RBP10.42□□□□□ -0.74
LMO3-222ENST00000540445 LRRC2Q9BYS8 371 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 WNT8AQ9H1J5 351 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 IL23AQ9NPF7 189 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 TRMT13Q9NUP7 481 aaKnown RBP10.42□□□□□ -0.74
LMO3-222ENST00000540445 DDX41Q9UJV9 622 aaKnown RBP10.42□□□□□ -0.74
LMO3-222ENST00000540445 SLC12A7Q9Y666 1083 aa10.42□□□□□ -0.74
LMO3-222ENST00000540445 TRANK1O15050 2925 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 SH2B2O14492 632 aaPredicted RBP10.41□□□□□ -0.74
LMO3-222ENST00000540445 SORBS3O60504 671 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 CDC45O75419 566 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 FGBP02675 491 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 MMP3P08254 477 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 CYP2C9P11712 490 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 RXRAP19793 462 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 DNAJB2P25686 324 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 SMARCA1P28370 1054 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 CCND2P30279 289 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 LIFRP42702 1097 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 LAMC2Q13753 1193 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 PGM5Q15124 567 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 DGKDQ16760 1214 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 SLC35G1Q2M3R5 365 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 NFRKBQ6P4R8 1299 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 PSRC1Q6PGN9 363 aaPredicted RBP10.41□□□□□ -0.74
LMO3-222ENST00000540445 KCNV1Q6PIU1 500 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 RAB11FIP4Q86YS3 637 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 CMTR1Q8N1G2 835 aaKnown RBP10.41□□□□□ -0.74
LMO3-222ENST00000540445 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 MYLIPQ8WY64 445 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 HERVK_113Q902F9 699 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 NEK1Q96PY6 1258 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 PDCD2LQ9BRP1 358 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 NOD1Q9Y239 953 aa10.41□□□□□ -0.74
LMO3-222ENST00000540445 DLL1O00548 723 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 FGD1P98174 961 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 PTPN11Q06124 597 aaPredicted RBP10.4□□□□□ -0.74
LMO3-222ENST00000540445 ARHGAP1Q07960 439 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 OTOP2Q7RTS6 562 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 DEFB128Q7Z7B8 93 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 VSIG10LQ86VR7 867 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 SRBD1Q8N5C6 995 aaKnown RBP10.4□□□□□ -0.74
LMO3-222ENST00000540445 FANCBQ8NB91 859 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 SCLYQ96I15 445 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 ALG1Q9BT22 464 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 SPZ1Q9BXG8 430 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 MTIF3Q9H2K0 278 aaKnown RBP10.4□□□□□ -0.74
LMO3-222ENST00000540445 MLXIPQ9HAP2 919 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 RTEL1Q9NZ71 1219 aa10.4□□□□□ -0.74
LMO3-222ENST00000540445 CUL9Q8IWT3 2517 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 hCG_1642624A0A1W2PR95 340 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 GRXCR1A8MXD5 290 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 PLEKHA8P1O95397 391 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms