RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SLC9A7Q96T83 725 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 TSPYL2Q9H2G4 693 aaPredicted RBP17.74■□□□□ 0.43
UBE3B-211ENST00000539843 PRDM12Q9H4Q4 367 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 COL20A1Q9P218 1284 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 MAD2L2Q9UI95 211 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 PCDHA11Q9Y5I1 949 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 PALM3A6NDB9 673 aaPredicted RBP17.73■□□□□ 0.43
UBE3B-211ENST00000539843 CYP21A2P08686 494 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 IGFBP4P22692 258 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 PDE4AP27815 886 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 CCND2P30279 289 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 KCNJ6P48051 423 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 HSD17B4P51659 736 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 ARHGAP1Q07960 439 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 GRM4Q14833 912 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 TMEM67Q5HYA8 995 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 CASC1Q6TDU7 716 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 CYB5R4Q7L1T6 521 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 PPTC7Q8NI37 304 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 CTCFLQ8NI51 663 aaPredicted RBP17.73■□□□□ 0.43
UBE3B-211ENST00000539843 EMID1Q96A84 441 aaPredicted RBP17.73■□□□□ 0.43
UBE3B-211ENST00000539843 DDX41Q9UJV9 622 aaKnown RBP17.73■□□□□ 0.43
UBE3B-211ENST00000539843 COL6A3P12111 3177 aa17.73■□□□□ 0.43
UBE3B-211ENST00000539843 E7EWF7 191 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 BAIAP3O94812 1187 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 IQCF3P0C7M6 154 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 KIF5BP33176 963 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 GHRHRQ02643 423 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 GNPTABQ3T906 1256 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 SESTD1Q86VW0 696 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 IL27Q8NEV9 243 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 PHOSPHO2Q8TCD6 241 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 PPM1EQ8WY54 764 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 MTMR8Q96EF0 704 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 PDCD2LQ9BRP1 358 aa17.72■□□□□ 0.43
UBE3B-211ENST00000539843 CUL9Q8IWT3 2517 aa17.71■□□□□ 0.43
UBE3B-211ENST00000539843 PNMA6FA0A0J9YX94 578 aa17.71■□□□□ 0.43
UBE3B-211ENST00000539843 SGSM2O43147 1006 aa17.71■□□□□ 0.43
UBE3B-211ENST00000539843 TGFB3P10600 412 aa17.71■□□□□ 0.43
UBE3B-211ENST00000539843 STOX1Q6ZVD7 989 aa17.71■□□□□ 0.43
UBE3B-211ENST00000539843 CUL5Q93034 780 aa17.71■□□□□ 0.43
UBE3B-211ENST00000539843 PIGSQ96S52 555 aa17.71■□□□□ 0.43
UBE3B-211ENST00000539843 IL25Q9H293 177 aa17.71■□□□□ 0.43
UBE3B-211ENST00000539843 SEC63Q9UGP8 760 aaKnown RBP17.71■□□□□ 0.43
UBE3B-211ENST00000539843 SCN10AQ9Y5Y9 1956 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 SELPP16109 830 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 HOXA13P31271 388 aaPredicted RBP17.7■□□□□ 0.42
UBE3B-211ENST00000539843 PSEN2P49810 448 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 RABGGTBP53611 331 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 PTH1RQ03431 593 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 PGM5Q15124 567 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 TJAP1Q5JTD0 557 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 FCHSD1Q86WN1 690 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 SPATA33Q96N06 139 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 LZTS2Q9BRK4 669 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 ALG1Q9BT22 464 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 RIOX1Q9H6W3 641 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 MLXIPQ9HAP2 919 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 GTF2IRD1Q9UHL9 959 aa17.7■□□□□ 0.42
UBE3B-211ENST00000539843 NOP56O00567 594 aaKnown RBP17.69■□□□□ 0.42
UBE3B-211ENST00000539843 GTPBP6O43824 516 aaPredicted RBP17.69■□□□□ 0.42
UBE3B-211ENST00000539843 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 STAM2O75886 525 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 DDAH1O94760 285 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 GNAQP50148 359 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 MFSD10Q14728 455 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 KIAA0753Q2KHM9 967 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 NFXL1Q6ZNB6 911 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 LRRC8DQ7L1W4 858 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 VSIG10LQ86VR7 867 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 TMTC2Q8N394 836 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 RRP36Q96EU6 259 aaKnown RBP17.69■□□□□ 0.42
UBE3B-211ENST00000539843 MTA3Q9BTC8 594 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 THEGQ9P2T0 379 aa17.69■□□□□ 0.42
UBE3B-211ENST00000539843 YBX2Q9Y2T7 364 aaKnown RBP17.69■□□□□ 0.42
UBE3B-211ENST00000539843 CCDC69A6NI79 296 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 EFCAB14O75071 495 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 GGPS1O95749 300 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 F2P00734 622 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 ZNF286BP0CG31 522 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 IRX6P78412 446 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-211ENST00000539843 TROAPQ12815 778 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 GDF6Q6KF10 455 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-211ENST00000539843 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 PPP1R13LQ8WUF5 828 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 ATXN2LQ8WWM7 1075 aaKnown RBP17.68■□□□□ 0.42
UBE3B-211ENST00000539843 MAP3K14Q99558 947 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 HDAC6Q9UBN7 1215 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 MYH6P13533 1939 aa17.68■□□□□ 0.42
UBE3B-211ENST00000539843 OPLAHO14841 1288 aa17.67■□□□□ 0.42
UBE3B-211ENST00000539843 PPP1R11O60927 126 aaPredicted RBP17.67■□□□□ 0.42
UBE3B-211ENST00000539843 MCM5P33992 734 aa17.67■□□□□ 0.42
UBE3B-211ENST00000539843 PTK7Q13308 1070 aa17.67■□□□□ 0.42
UBE3B-211ENST00000539843 CELF3Q5SZQ8 465 aaKnown RBP17.67■□□□□ 0.42
UBE3B-211ENST00000539843 MYSM1Q5VVJ2 828 aa17.67■□□□□ 0.42
UBE3B-211ENST00000539843 KAT2BQ92831 832 aa17.67■□□□□ 0.42
UBE3B-211ENST00000539843 MAP4K1Q92918 833 aa17.67■□□□□ 0.42
UBE3B-211ENST00000539843 ZBED2Q9BTP6 218 aa17.67■□□□□ 0.42
UBE3B-211ENST00000539843 RBM8AQ9Y5S9 174 aaKnown RBP17.67■□□□□ 0.42
UBE3B-211ENST00000539843 CA3P07451 260 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms