RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 PCNX4Q63HM2 1172 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRAF3-204ENST00000539721 IL31RAQ8NI17 732 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 NSUN6Q8TEA1 469 aaKnown RBP18.28■□□□□ 0.52
TRAF3-204ENST00000539721 MMP19Q99542 508 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 PDCD2LQ9BRP1 358 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 PORCNQ9H237 461 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 R3HDMLQ9H3Y0 253 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 TMEM63CQ9P1W3 806 aa18.28■□□□□ 0.52
TRAF3-204ENST00000539721 MYCLP12524 364 aaPredicted RBP18.27■□□□□ 0.52
TRAF3-204ENST00000539721 KCTD2Q14681 263 aa18.27■□□□□ 0.52
TRAF3-204ENST00000539721 FAM110CQ1W6H9 321 aa18.27■□□□□ 0.52
TRAF3-204ENST00000539721 CEP55Q53EZ4 464 aa18.27■□□□□ 0.52
TRAF3-204ENST00000539721 PLA2G4DQ86XP0 818 aa18.27■□□□□ 0.52
TRAF3-204ENST00000539721 ENGASEQ8NFI3 743 aa18.27■□□□□ 0.52
TRAF3-204ENST00000539721 CYP2W1Q8TAV3 490 aa18.27■□□□□ 0.52
TRAF3-204ENST00000539721 LENG9Q96B70 501 aa18.27■□□□□ 0.52
TRAF3-204ENST00000539721 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
TRAF3-204ENST00000539721 GZF1Q9H116 711 aaPredicted RBP18.27■□□□□ 0.52
TRAF3-204ENST00000539721 EFCC1Q9HA90 598 aa18.27■□□□□ 0.52
TRAF3-204ENST00000539721 KCNMB3Q9NPA1 279 aa18.27■□□□□ 0.52
TRAF3-204ENST00000539721 DDX19AQ9NUU7 478 aaKnown RBP18.27■□□□□ 0.52
TRAF3-204ENST00000539721 ZNFX1Q9P2E3 1918 aaKnown RBP18.27■□□□□ 0.52
TRAF3-204ENST00000539721 IGLV3-22A0A075B6J6 115 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 FAM237AA0A1B0GTK4 181 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 RASSF10A6NK89 507 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 POTEB2H3BUK9 544 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 TECP42680 631 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 TM4SF4P48230 202 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 SYMPKQ92797 1274 aaKnown RBP18.27■□□□□ 0.51
TRAF3-204ENST00000539721 HAS1Q92839 578 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 ZIC5Q96T25 663 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 MXRA8Q9BRK3 442 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 CPA4Q9UI42 421 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 HPSEQ9Y251 543 aa18.27■□□□□ 0.51
TRAF3-204ENST00000539721 ADGRA2Q96PE1 1338 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 TBX3O15119 743 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 FCER1AP12319 257 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 CCND2P30279 289 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 SYKP43405 635 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 SETQ01105 290 aaPredicted RBP18.26■□□□□ 0.51
TRAF3-204ENST00000539721 CNTN2Q02246 1040 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 NOGQ13253 232 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 SNW1Q13573 536 aaKnown RBP18.26■□□□□ 0.51
TRAF3-204ENST00000539721 CCDC183Q5T5S1 534 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 USP49Q70CQ1 688 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 SLFN12Q8IYM2 578 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 FMR1NBQ8N0W7 255 aaPredicted RBP18.26■□□□□ 0.51
TRAF3-204ENST00000539721 DNERQ8NFT8 737 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 ETNPPLQ8TBG4 499 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 EPSTI1Q96J88 318 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 CAPNS2Q96L46 248 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 UIMC1Q96RL1 719 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 KCNH3Q9ULD8 1083 aa18.26■□□□□ 0.51
TRAF3-204ENST00000539721 MSH4O15457 936 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 KINO60870 393 aaKnown RBP18.25■□□□□ 0.51
TRAF3-204ENST00000539721 NR3C2P08235 984 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 FXR2P51116 673 aaKnown RBP eCLIP18.25■□□□□ 0.51
TRAF3-204ENST00000539721 MRPS9P82933 396 aaKnown RBP18.25■□□□□ 0.51
TRAF3-204ENST00000539721 XRRA1Q6P2D8 792 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 GJA10Q969M2 543 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 AK8Q96MA6 479 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 ANP32EQ9BTT0 268 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 RAB34Q9BZG1 259 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
TRAF3-204ENST00000539721 ZFYVE28Q9HCC9 887 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 MEIS1O00470 390 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 TXLNAP40222 546 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 NIPA1Q7RTP0 329 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 FAM20AQ96MK3 541 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 NUP62CLQ9H1M0 184 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 ADD3Q9UEY8 706 aaKnown RBP18.25■□□□□ 0.51
TRAF3-204ENST00000539721 PCDHA12Q9UN75 941 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 UBIAD1Q9Y5Z9 338 aa18.25■□□□□ 0.51
TRAF3-204ENST00000539721 AOC2O75106 756 aa18.24■□□□□ 0.51
TRAF3-204ENST00000539721 ZNF202O95125 648 aa18.24■□□□□ 0.51
TRAF3-204ENST00000539721 PGK2P07205 417 aa18.24■□□□□ 0.51
TRAF3-204ENST00000539721 ITGB5P18084 799 aa18.24■□□□□ 0.51
TRAF3-204ENST00000539721 ALDH5A1P51649 535 aaPredicted RBP18.24■□□□□ 0.51
TRAF3-204ENST00000539721 VSIG10LQ86VR7 867 aa18.24■□□□□ 0.51
TRAF3-204ENST00000539721 IGSF22Q8N9C0 903 aa18.24■□□□□ 0.51
TRAF3-204ENST00000539721 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
TRAF3-204ENST00000539721 IWS1Q96ST2 819 aa18.24■□□□□ 0.51
TRAF3-204ENST00000539721 CLSTN2Q9H4D0 955 aa18.24■□□□□ 0.51
TRAF3-204ENST00000539721 SOWAHBA6NEL2 793 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 PP2D1A8MPX8 630 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 TLR2O60603 784 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 ARP10275 920 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 BCRP11274 1271 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 UBA7P41226 1012 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 JADE2Q9NQC1 790 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 LRWD1Q9UFC0 647 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 IVNS1ABPQ9Y6Y0 642 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 PLXNA1Q9UIW2 1896 aa18.23■□□□□ 0.51
TRAF3-204ENST00000539721 CDC25AP30304 524 aa18.22■□□□□ 0.51
TRAF3-204ENST00000539721 MAPK4P31152 587 aa18.22■□□□□ 0.51
TRAF3-204ENST00000539721 PDIA5Q14554 519 aa18.22■□□□□ 0.51
TRAF3-204ENST00000539721 ZSCAN23Q3MJ62 389 aa18.22■□□□□ 0.51
TRAF3-204ENST00000539721 PDILTQ8N807 584 aa18.22■□□□□ 0.51
TRAF3-204ENST00000539721 ZNF577Q9BSK1 485 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms