RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 CUTAO60888 179 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 ERCC3P19447 782 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 PTPREP23469 700 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 PRPHP41219 470 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 PTGDRQ13258 359 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 BAATQ14032 418 aaPredicted RBP12.09□□□□□ -0.47
LEMD3-202ENST00000539442 TAF1CQ15572 869 aaPredicted RBP12.09□□□□□ -0.47
LEMD3-202ENST00000539442 XRRA1Q6P2D8 792 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
LEMD3-202ENST00000539442 MBOAT7Q96N66 472 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 COL20A1Q9P218 1284 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 PCDHA7Q9UN72 937 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
LEMD3-202ENST00000539442 TCHHQ07283 1943 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 ADGRA2Q96PE1 1338 aa12.09□□□□□ -0.47
LEMD3-202ENST00000539442 EDIL3O43854 480 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 GADD45BO75293 160 aaPredicted RBP12.08□□□□□ -0.48
LEMD3-202ENST00000539442 TDP2O95551 362 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 ALDH1A1P00352 501 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 OR52Z1P0C646 297 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 MARCKSP29966 332 aaPredicted RBP12.08□□□□□ -0.48
LEMD3-202ENST00000539442 KLHL40Q2TBA0 621 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 Q3C1V9 767 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 Q4G0T1 1027 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 AXDND1Q5T1B0 1012 aaPredicted RBP12.08□□□□□ -0.48
LEMD3-202ENST00000539442 CYP4F22Q6NT55 531 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 ANKRD35Q8N283 1001 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 ANKRD13CQ8N6S4 541 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 C4orf32Q8N8J7 132 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 DNERQ8NFT8 737 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 CAPNS2Q96L46 248 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 DDX25Q9UHL0 483 aaKnown RBP12.08□□□□□ -0.48
LEMD3-202ENST00000539442 FBXO2Q9UK22 296 aaPredicted RBP12.08□□□□□ -0.48
LEMD3-202ENST00000539442 SMCHD1A6NHR9 2005 aa12.08□□□□□ -0.48
LEMD3-202ENST00000539442 TBX3O15119 743 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 TLR2O60603 784 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 PEX10O60683 326 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 SETQ01105 290 aaPredicted RBP12.07□□□□□ -0.48
LEMD3-202ENST00000539442 KCTD2Q14681 263 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 CALCRLQ16602 461 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 PCNX4Q63HM2 1172 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 ABRAQ8N0Z2 381 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 NSUN6Q8TEA1 469 aaKnown RBP12.07□□□□□ -0.48
LEMD3-202ENST00000539442 MRPS27Q92552 414 aaKnown RBP12.07□□□□□ -0.48
LEMD3-202ENST00000539442 TAAR1Q96RJ0 339 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 RMDN3Q96TC7 470 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 PDCD2LQ9BRP1 358 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 ZFYVE28Q9HCC9 887 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 PXMP2Q9NR77 195 aa12.07□□□□□ -0.48
LEMD3-202ENST00000539442 DDX49Q9Y6V7 483 aaKnown RBP12.07□□□□□ -0.48
LEMD3-202ENST00000539442 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 B4DLN1 442 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 STRNO43815 780 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 SLC37A4O43826 429 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 TRAK2O60296 914 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 BCRP11274 1271 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 FCER1AP12319 257 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 CMA1P23946 247 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 MAPK4P31152 587 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 ZNF76P36508 570 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 LONP1P36776 959 aaKnown RBP12.06□□□□□ -0.48
LEMD3-202ENST00000539442 PGM5Q15124 567 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 PWP2Q15269 919 aaKnown RBP12.06□□□□□ -0.48
LEMD3-202ENST00000539442 CEP55Q53EZ4 464 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 ARHGEF16Q5VV41 709 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 DTHD1Q6ZMT9 781 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 NIPA1Q7RTP0 329 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 CCAR1Q8IX12 1150 aaKnown RBP12.06□□□□□ -0.48
LEMD3-202ENST00000539442 SLFN12Q8IYM2 578 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 GPT2Q8TD30 523 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 MTMR9Q96QG7 549 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 IWS1Q96ST2 819 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 MMP19Q99542 508 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 TMEM60Q9H2L4 133 aa12.06□□□□□ -0.48
LEMD3-202ENST00000539442 ADD3Q9UEY8 706 aaKnown RBP12.06□□□□□ -0.48
LEMD3-202ENST00000539442 IGLV3-22A0A075B6J6 115 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 FAM237AA0A1B0GTK4 181 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 FAM86B1E9PN63 330 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 CA12O43570 354 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 STAM2O75886 525 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 FAM86B2P0C5J1 330 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 EIF2AK2P19525 551 aaKnown RBP12.05□□□□□ -0.48
LEMD3-202ENST00000539442 CCND2P30279 289 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 GRM1Q13255 1194 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 TMEM266Q2M3C6 531 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 PRR16Q569H4 304 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 RESP18Q5W5W9 173 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 C17orf99Q6UX52 265 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 CCDC73Q6ZRK6 1079 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 FAM133AQ8N9E0 248 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 LENG9Q96B70 501 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 AK8Q96MA6 479 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 MPHOSPH6Q99547 160 aaKnown RBP12.05□□□□□ -0.48
LEMD3-202ENST00000539442 MXRA8Q9BRK3 442 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 RAB34Q9BZG1 259 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 PORCNQ9H237 461 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 EFCC1Q9HA90 598 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 KCNMB3Q9NPA1 279 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 UBIAD1Q9Y5Z9 338 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms