RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TMEM260Q9NX78 707 aa11.61□□□□□ -0.55
CLPB-210ENST00000539148 NRBP1Q9UHY1 535 aa11.61□□□□□ -0.55
CLPB-210ENST00000539148 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
CLPB-210ENST00000539148 MCM3APO60318 1980 aa11.61□□□□□ -0.55
CLPB-210ENST00000539148 RPTORQ8N122 1335 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 TBX3O15119 743 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 CCNT1O60563 726 aaKnown RBP11.6□□□□□ -0.55
CLPB-210ENST00000539148 LETM1O95202 739 aaPredicted RBP11.6□□□□□ -0.55
CLPB-210ENST00000539148 TGFB3P10600 412 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 MYCLP12524 364 aaPredicted RBP11.6□□□□□ -0.55
CLPB-210ENST00000539148 CIITAP33076 1130 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 SF3A1Q15459 793 aaKnown RBP11.6□□□□□ -0.55
CLPB-210ENST00000539148 PKN2Q16513 984 aaKnown RBP11.6□□□□□ -0.55
CLPB-210ENST00000539148 TMEM266Q2M3C6 531 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 CEP55Q53EZ4 464 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 TTC38Q5R3I4 469 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 MAMDC4Q6UXC1 1216 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 VSIG10LQ86VR7 867 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 TMEM87AQ8NBN3 555 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 RAET1EQ8TD07 263 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 ZNF296Q8WUU4 475 aaPredicted RBP11.6□□□□□ -0.55
CLPB-210ENST00000539148 TBC1D5Q92609 795 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 GPRASP2Q96D09 838 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 ABHD16BQ9H3Z7 469 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 VTA1Q9NP79 307 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 PRDM10Q9NQV6 1147 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 SRRDQ9UH36 339 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 STK24Q9Y6E0 443 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 LCTP09848 1927 aa11.6□□□□□ -0.55
CLPB-210ENST00000539148 CYP3A7-CYP3A51PA0A087WV96 503 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 FIBPO43427 364 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 NEMFO60524 1076 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 DTNBO60941 627 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 YEATS4O95619 227 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 PGK2P07205 417 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 CYP3A7P24462 503 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 CNTN2Q02246 1040 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 MTMR1Q13613 665 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 ARL6IP4Q66PJ3 421 aaKnown RBP11.59□□□□□ -0.55
CLPB-210ENST00000539148 CD99L2Q8TCZ2 262 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 RASGRP4Q8TDF6 673 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 KCNG4Q8TDN1 519 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 MORC4Q8TE76 937 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 PXYLP1Q8TE99 480 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 MAML3Q96JK9 1138 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 TRIM47Q96LD4 638 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 FAM20AQ96MK3 541 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 TINF2Q9BSI4 451 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
CLPB-210ENST00000539148 DDX25Q9UHL0 483 aaKnown RBP11.59□□□□□ -0.55
CLPB-210ENST00000539148 GOLGA6L4A6NEF3 574 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 KIF28PB7ZC32 967 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 PEX10O60683 326 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 ATP2B1P20020 1258 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 CYP2B6P20813 491 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 EDNRBP24530 442 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 MCM7P33993 719 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 PRPHP41219 470 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 FLT3LGP49771 235 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 STK38Q15208 465 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 CALCRLQ16602 461 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 Q4G0T1 1027 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 FOXD4L5Q5VV16 416 aaPredicted RBP11.58□□□□□ -0.56
CLPB-210ENST00000539148 ANO1Q5XXA6 986 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 ARMCX2Q7L311 632 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 PLA2G4DQ86XP0 818 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 SCFD2Q8WU76 684 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 FOXD4L4Q8WXT5 416 aaPredicted RBP11.58□□□□□ -0.56
CLPB-210ENST00000539148 ANP32BQ92688 251 aaKnown RBP11.58□□□□□ -0.56
CLPB-210ENST00000539148 USP6NLQ92738 828 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 FERMT2Q96AC1 680 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 SHISA4Q96DD7 197 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 MXRA8Q9BRK3 442 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 JADE2Q9NQC1 790 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 TBC1D22BQ9NU19 505 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 RTEL1Q9NZ71 1219 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 COL20A1Q9P218 1284 aa11.58□□□□□ -0.56
CLPB-210ENST00000539148 MORC2Q9Y6X9 1032 aaPredicted RBP11.58□□□□□ -0.56
CLPB-210ENST00000539148 SOWAHBA6NEL2 793 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 MEIS1O00470 390 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 NKRFO15226 690 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLPB-210ENST00000539148 COBLO75128 1261 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
CLPB-210ENST00000539148 PKP1Q13835 747 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 NEDD9Q14511 834 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 TTLL4Q14679 1199 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 PRR16Q569H4 304 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 BRDTQ58F21 947 aaPredicted RBP11.57□□□□□ -0.56
CLPB-210ENST00000539148 CRYGNQ8WXF5 182 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 SPATA32Q96LK8 384 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 INPP4AQ96PE3 977 aaPredicted RBP11.57□□□□□ -0.56
CLPB-210ENST00000539148 RIT2Q99578 217 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 SDF4Q9BRK5 362 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 WDR11Q9BZH6 1224 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 R3HDMLQ9H3Y0 253 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 LMBRD1Q9NUN5 540 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
CLPB-210ENST00000539148 GJD2Q9UKL4 321 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 ZDHHC9Q9Y397 364 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms