RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 GCFC2P16383 781 aaKnown RBP16.04■□□□□ 0.16
CD4-208ENST00000538827 ATP2C1P98194 919 aaPredicted RBP16.04■□□□□ 0.16
CD4-208ENST00000538827 PTGDRQ13258 359 aa16.04■□□□□ 0.16
CD4-208ENST00000538827 ORC2Q13416 577 aaPredicted RBP16.04■□□□□ 0.16
CD4-208ENST00000538827 KCTD2Q14681 263 aa16.04■□□□□ 0.16
CD4-208ENST00000538827 RMDN3Q96TC7 470 aa16.04■□□□□ 0.16
CD4-208ENST00000538827 R3HDMLQ9H3Y0 253 aa16.04■□□□□ 0.16
CD4-208ENST00000538827 PXMP2Q9NR77 195 aa16.04■□□□□ 0.16
CD4-208ENST00000538827 SZT2Q5T011 3432 aa16.04■□□□□ 0.16
CD4-208ENST00000538827 MGAMO43451 1857 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 CEP290O15078 2479 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 FRMPD4Q14CM0 1322 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 HTTP42858 3142 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 PPP6R2O75170 966 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 FCER1AP12319 257 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 MYCLP12524 364 aaPredicted RBP16.03■□□□□ 0.16
CD4-208ENST00000538827 UBE2HP62256 183 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 CRHR2Q13324 411 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 CALCRLQ16602 461 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 OTOP1Q7RTM1 612 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 KRI1Q8N9T8 703 aaKnown RBP16.03■□□□□ 0.16
CD4-208ENST00000538827 IL31RAQ8NI17 732 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 ARMC5Q96C12 935 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 ZFP91Q96JP5 570 aaPredicted RBP16.03■□□□□ 0.16
CD4-208ENST00000538827 TMEM60Q9H2L4 133 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 PCDHA7Q9UN72 937 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 IVNS1ABPQ9Y6Y0 642 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 ZNF236Q9UL36 1845 aa16.03■□□□□ 0.16
CD4-208ENST00000538827 BCRP11274 1271 aa16.02■□□□□ 0.16
CD4-208ENST00000538827 EN2P19622 333 aaPredicted RBP16.02■□□□□ 0.16
CD4-208ENST00000538827 USP11P51784 963 aa16.02■□□□□ 0.16
CD4-208ENST00000538827 PGM5Q15124 567 aa16.02■□□□□ 0.16
CD4-208ENST00000538827 PRR16Q569H4 304 aa16.02■□□□□ 0.16
CD4-208ENST00000538827 MOXD1Q6UVY6 613 aa16.02■□□□□ 0.16
CD4-208ENST00000538827 UIMC1Q96RL1 719 aa16.02■□□□□ 0.16
CD4-208ENST00000538827 TMEM106CQ9BVX2 250 aa16.02■□□□□ 0.16
CD4-208ENST00000538827 FBXO2Q9UK22 296 aaPredicted RBP16.02■□□□□ 0.16
CD4-208ENST00000538827 ZSWIM8A7E2V4 1837 aa16.02■□□□□ 0.16
CD4-208ENST00000538827 VWA3AA6NCI4 1184 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 EDIL3O43854 480 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 TLR2O60603 784 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 CUTAO60888 179 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 PGK2P07205 417 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 CYP3A4P08684 503 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 CCND2P30279 289 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 ALDH5A1P51649 535 aaPredicted RBP16.01■□□□□ 0.15
CD4-208ENST00000538827 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 PPP4R3AQ6IN85 833 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 FSIP1Q8NA03 581 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 NSUN6Q8TEA1 469 aaKnown RBP16.01■□□□□ 0.15
CD4-208ENST00000538827 CLIC6Q96NY7 704 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 PDCD2LQ9BRP1 358 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 MAF1Q9H063 256 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 DDX49Q9Y6V7 483 aaKnown RBP16.01■□□□□ 0.15
CD4-208ENST00000538827 KIAA1217Q5T5P2 1943 aa16.01■□□□□ 0.15
CD4-208ENST00000538827 MCM3APO60318 1980 aa16■□□□□ 0.15
CD4-208ENST00000538827 MBD3O95983 291 aa16■□□□□ 0.15
CD4-208ENST00000538827 MAPK4P31152 587 aa16■□□□□ 0.15
CD4-208ENST00000538827 GRIN1Q05586 938 aa16■□□□□ 0.15
CD4-208ENST00000538827 PCNX4Q63HM2 1172 aa16■□□□□ 0.15
CD4-208ENST00000538827 CCDC73Q6ZRK6 1079 aa16■□□□□ 0.15
CD4-208ENST00000538827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16■□□□□ 0.15
CD4-208ENST00000538827 GPR142Q7Z601 462 aa16■□□□□ 0.15
CD4-208ENST00000538827 PLEKHH3Q7Z736 793 aa16■□□□□ 0.15
CD4-208ENST00000538827 PLA2G4DQ86XP0 818 aa16■□□□□ 0.15
CD4-208ENST00000538827 CRYGNQ8WXF5 182 aa16■□□□□ 0.15
CD4-208ENST00000538827 FERMT2Q96AC1 680 aa16■□□□□ 0.15
CD4-208ENST00000538827 ERO1AQ96HE7 468 aa16■□□□□ 0.15
CD4-208ENST00000538827 ADD3Q9UEY8 706 aaKnown RBP16■□□□□ 0.15
CD4-208ENST00000538827 FAM86B1E9PN63 330 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 LAD1O00515 517 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 FAM86B2P0C5J1 330 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 PTPREP23469 700 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 ADORA2AP29274 412 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 CIITAP33076 1130 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 TXKP42681 527 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 SETQ01105 290 aaPredicted RBP15.99■□□□□ 0.15
CD4-208ENST00000538827 TMEM266Q2M3C6 531 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 Q4G0T1 1027 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 SPECC1Q5M775 1068 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 C17orf99Q6UX52 265 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 DTHD1Q6ZMT9 781 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 C4orf32Q8N8J7 132 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 DNERQ8NFT8 737 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 MRPS27Q92552 414 aaKnown RBP15.99■□□□□ 0.15
CD4-208ENST00000538827 MBOAT7Q96N66 472 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 MXRA8Q9BRK3 442 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 CSRNP2Q9H175 543 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 PKD2L1Q9P0L9 805 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 SRPRBQ9Y5M8 271 aaKnown RBP15.99■□□□□ 0.15
CD4-208ENST00000538827 CENPFP49454 3210 aa15.99■□□□□ 0.15
CD4-208ENST00000538827 CYP3A7-CYP3A51PA0A087WV96 503 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 SOWAHBA6NEL2 793 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 TRAK2O60296 914 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 NR3C2P08235 984 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 CYP3A7P24462 503 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 PRPHP41219 470 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 PDE4DQ08499 809 aa15.98■□□□□ 0.15
CD4-208ENST00000538827 CEP55Q53EZ4 464 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms