RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 MAD2L2Q9UI95 211 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 PCDHA11Q9Y5I1 949 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 COL4A4P53420 1690 aaPredicted RBP10.05□□□□□ -0.8
DDB1-212ENST00000538470 NCOR1O75376 2440 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 PRUNE2Q8WUY3 3088 aa10.05□□□□□ -0.8
DDB1-212ENST00000538470 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 GRXCR1A8MXD5 290 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 OPLAHO14841 1288 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 SGSM2O43147 1006 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 BAIAP3O94812 1187 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 PARNO95453 639 aaKnown RBP10.04□□□□□ -0.8
DDB1-212ENST00000538470 NR3C2P08235 984 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 CYP21A2P08686 494 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 ATP2A2P16615 1042 aaKnown RBP10.04□□□□□ -0.8
DDB1-212ENST00000538470 CASTP20810 708 aaKnown RBP10.04□□□□□ -0.8
DDB1-212ENST00000538470 WTAPQ15007 396 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 DGKDQ16760 1214 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 LY6KQ17RY6 165 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 SEPT14Q6ZU15 432 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 RETREG2Q8NC44 543 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 NCOA7Q8NI08 942 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 PPTC7Q8NI37 304 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 AFG1LQ8WV93 481 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 TBC1D5Q92609 795 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 SYMPKQ92797 1274 aaKnown RBP10.04□□□□□ -0.8
DDB1-212ENST00000538470 VWCEQ96DN2 955 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 PDCD2LQ9BRP1 358 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 MTA3Q9BTC8 594 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 NKX2-4Q9H2Z4 354 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 SLC28A3Q9HAS3 691 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 VAT1LQ9HCJ6 419 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 MRVI1Q9Y6F6 885 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 FRMPD4Q14CM0 1322 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 MICAL3Q7RTP6 2002 aa10.04□□□□□ -0.8
DDB1-212ENST00000538470 VCANP13611 3396 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 E7EWF7 191 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 IFIT3O14879 490 aaKnown RBP10.03□□□□□ -0.8
DDB1-212ENST00000538470 PPP1R11O60927 126 aaPredicted RBP10.03□□□□□ -0.8
DDB1-212ENST00000538470 F2P00734 622 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 IQCF3P0C7M6 154 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 HOXD8P13378 290 aaPredicted RBP10.03□□□□□ -0.8
DDB1-212ENST00000538470 IRX6P78412 446 aaPredicted RBP10.03□□□□□ -0.8
DDB1-212ENST00000538470 LAMC2Q13753 1193 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 PTGISQ16647 500 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 PPP2R2DQ66LE6 453 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 STOX1Q6ZVD7 989 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 CATIPQ7Z7H3 387 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 PHOSPHO2Q8TCD6 241 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 MAP3K14Q99558 947 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 RIOX1Q9H6W3 641 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 DOCK5Q9H7D0 1870 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 GTF2IRD1Q9UHL9 959 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
DDB1-212ENST00000538470 YBX2Q9Y2T7 364 aaKnown RBP10.03□□□□□ -0.8
DDB1-212ENST00000538470 PCDHA1Q9Y5I3 950 aa10.03□□□□□ -0.8
DDB1-212ENST00000538470 CHD7Q9P2D1 2997 aa10.02□□□□□ -0.8
DDB1-212ENST00000538470 KAT6AQ92794 2004 aa10.02□□□□□ -0.8
DDB1-212ENST00000538470 SPTBN5Q9NRC6 3674 aaKnown RBP10.02□□□□□ -0.8
DDB1-212ENST00000538470 TRANK1O15050 2925 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 PNMA6FA0A0J9YX94 578 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 GCOM1H8Y6P7 765 aaPredicted RBP10.02□□□□□ -0.81
DDB1-212ENST00000538470 STAM2O75886 525 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 DDAH1O94760 285 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 POLR2MP0CAP2 368 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 TGFB3P10600 412 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 CCND2P30279 289 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 PSEN2P49810 448 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 PTH1RQ03431 593 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 TROAPQ12815 778 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 PGM5Q15124 567 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 DEFB128Q7Z7B8 93 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 HOMER1Q86YM7 354 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 DHX37Q8IY37 1157 aaKnown RBP10.02□□□□□ -0.81
DDB1-212ENST00000538470 MB21D2Q8IYB1 491 aaPredicted RBP10.02□□□□□ -0.81
DDB1-212ENST00000538470 USP38Q8NB14 1042 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 KAT2BQ92831 832 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 MAP4K1Q92918 833 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 PRDM12Q9H4Q4 367 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 SIP14410 1827 aa10.02□□□□□ -0.81
DDB1-212ENST00000538470 HAS3O00219 553 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 CYTH3O43739 400 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 RGS20O76081 388 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 SELPP16109 830 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 UBA1P22314 1058 aaKnown RBP10.01□□□□□ -0.81
DDB1-212ENST00000538470 PTK7Q13308 1070 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 MFSD10Q14728 455 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 SLC35G1Q2M3R5 365 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 GNPTABQ3T906 1256 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 TMEM67Q5HYA8 995 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 CELF3Q5SZQ8 465 aaKnown RBP10.01□□□□□ -0.81
DDB1-212ENST00000538470 GDF6Q6KF10 455 aaPredicted RBP10.01□□□□□ -0.81
DDB1-212ENST00000538470 LRRC8DQ7L1W4 858 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 CHST3Q7LGC8 479 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 VSIG10LQ86VR7 867 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 C7orf31Q8N865 590 aa10.01□□□□□ -0.81
DDB1-212ENST00000538470 CTCFLQ8NI51 663 aaPredicted RBP10.01□□□□□ -0.81
DDB1-212ENST00000538470 CTAGE1Q96RT6 745 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms