RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 VAT1LQ9HCJ6 419 aa4.05□□□□□ -1.76
PTPN22-211ENST00000538253 RBPJLQ9UBG7 517 aa4.05□□□□□ -1.76
PTPN22-211ENST00000538253 PCDHA4Q9UN74 947 aa4.05□□□□□ -1.76
PTPN22-211ENST00000538253 MRVI1Q9Y6F6 885 aa4.05□□□□□ -1.76
PTPN22-211ENST00000538253 SMCO2A6NFE2 343 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 FOXN1O15353 648 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 CFBP00751 764 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 FLT3LGP49771 235 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 MIS18BP1Q6P0N0 1132 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 BLIDQ8IZY5 108 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 MORC4Q8TE76 937 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 GLT1D1Q96MS3 346 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 RMDN3Q96TC7 470 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 JMJD4Q9H9V9 463 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 IL17RBQ9NRM6 502 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 NRBP2Q9NSY0 501 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 CFAP45Q9UL16 551 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 M0QZ92 97 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 TFRCP02786 760 aaKnown RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 CYP3A4P08684 503 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 ICAM3P32942 547 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 SLC4A3P48751 1232 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 HSD17B4P51659 736 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 NCBP1Q09161 790 aaKnown RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 TREML2Q5T2D2 321 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 PCNX4Q63HM2 1172 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 WWC2Q6AWC2 1192 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 CYB5R4Q7L1T6 521 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 OTUD6AQ7L8S5 288 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 RETREG2Q8NC44 543 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 RIT2Q99578 217 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 TIPINQ9BVW5 301 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 ZMYND12Q9H0C1 365 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 MLXIPQ9HAP2 919 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 BMP2KQ9NSY1 1161 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 MAD2L2Q9UI95 211 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 ZNF214Q9UL59 606 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 V9GY48 417 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 NFASCO94856 1347 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 ELP1O95163 1332 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 FRMPD2Q68DX3 1309 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 KDM3AQ9Y4C1 1321 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 FOCADQ5VW36 1801 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 A0A1W2PRG0 241 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 DCDC2CA8MYV0 355 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 CYP2C8P10632 490 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 CYP2B6P20813 491 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 CST5P28325 142 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 RFC2P35250 354 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 DNM2P50570 870 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 APOBRQ0VD83 1088 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 BFSP2Q13515 415 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 TMEM132BQ14DG7 1078 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 ZNF792Q3KQV3 632 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 STXBP4Q6ZWJ1 553 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 HACE1Q8IYU2 909 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 FAM133AQ8N9E0 248 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 PIGSQ96S52 555 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 ZKSCAN3Q9BRR0 538 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 MTG1Q9BT17 334 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 TEKT3Q9BXF9 490 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 DNAI2Q9GZS0 605 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 CCDC39Q9UFE4 941 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 DDX20Q9UHI6 824 aaKnown RBP4.04□□□□□ -1.76
PTPN22-211ENST00000538253 USP25Q9UHP3 1055 aa4.04□□□□□ -1.76
PTPN22-211ENST00000538253 GOLGA6L4A6NEF3 574 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 MAGEB2O15479 319 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 PSAPP07602 524 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 NR3C2P08235 984 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 PFKMP08237 780 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ACTN1P12814 892 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 TMOD1P28289 359 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 CNGA1P29973 690 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ALDH5A1P51649 535 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 AK2P54819 239 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 TNFAIP2Q03169 654 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ACVR2BQ13705 512 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 MOGSQ13724 837 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 BAATQ14032 418 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 PCBP1Q15365 356 aaKnown RBP eCLIP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 SF3A1Q15459 793 aaKnown RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 STOX1Q6ZVD7 989 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 NEK8Q86SG6 692 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 SLC51AQ86UW1 340 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 PIP4P2Q8N4L2 257 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 REPS2Q8NFH8 660 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 CDK5RAP3Q96JB5 506 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 AK8Q96MA6 479 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 LBHD1Q9BQE6 289 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ANO3Q9BYT9 981 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 INO80BQ9C086 356 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 CYP39A1Q9NYL5 469 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 NOD1Q9Y239 953 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 MORC2Q9Y6X9 1032 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 RBM47A0AV96 593 aaKnown RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 GOLGA6L3A6NEY3 463 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms