RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 NEDD9Q14511 834 aa13.72□□□□□ -0.21
TSPAN9-206ENST00000537971 REXO1Q8N1G1 1221 aaKnown RBP13.72□□□□□ -0.21
TSPAN9-206ENST00000537971 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.72□□□□□ -0.21
TSPAN9-206ENST00000537971 GJB1P08034 283 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 BCRP11274 1271 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 RPS6KB1P23443 525 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 UTP14CQ5TAP6 766 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 CCDC181Q5TID7 509 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 ALG1Q9BT22 464 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 KATNAL1Q9BW62 490 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 RBSNQ9H1K0 784 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 CEP131Q9UPN4 1083 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 DEXIO95424 95 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 STX1AQ16623 288 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 GAS2L3Q86XJ1 694 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 C7orf31Q8N865 590 aa13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 RRAGDQ9NQL2 400 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-206ENST00000537971 A0A1W2PRG0 241 aa13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 KPNA6O60684 536 aa13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 GH1P01241 217 aa13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 NCBP1Q09161 790 aaKnown RBP13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 IRF5Q13568 498 aa13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 PKP1Q13835 747 aa13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 GRM4Q14833 912 aa13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 JAKMIP3Q5VZ66 844 aa13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 GPAT2Q6NUI2 795 aa13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 SALL3Q9BXA9 1300 aa13.71□□□□□ -0.22
TSPAN9-206ENST00000537971 SUPT20HL2P0C7V6 817 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 RUFY3Q7L099 469 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 KIAA1328Q86T90 577 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 MSL3Q8N5Y2 521 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 SLC38A10Q9HBR0 1119 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 V9GYY5 206 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 NKRFO15226 690 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 CABYRO75952 493 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 XRCC5P13010 732 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 NOLC1Q14978 699 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 FAM200AQ8TCP9 573 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 ZBED2Q9BTP6 218 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 IDEP14735 1019 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 SYKP43405 635 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 AFMP43652 599 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 FAM160B1Q5W0V3 765 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 LUZP1Q86V48 1076 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 SAMD3Q8N6K7 520 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 ARHGAP39Q9C0H5 1083 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 ACVR2BQ13705 512 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 UNC93B1Q9H1C4 597 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 ZSCAN16Q9H4T2 348 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 C11orf49Q9H6J7 331 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 VTA1Q9NP79 307 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 TMEM39AQ9NV64 488 aa13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 SEPT11Q9NVA2 429 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 DDX20Q9UHI6 824 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-206ENST00000537971 ACTN1P12814 892 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 TMEM132BQ14DG7 1078 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 ERMNQ8TAM6 284 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 LSG1Q9H089 658 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 ZKSCAN5Q9Y2L8 839 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 KIF28PB7ZC32 967 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 ARMCX2Q7L311 632 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 METTL16Q86W50 562 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 ERCC4Q92889 916 aaPredicted RBP13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 NCOA5Q9HCD5 579 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 DIS3Q9Y2L1 958 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 SBF1O95248 1867 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 TYRO3Q06418 890 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 NRBP1Q9UHY1 535 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 GABRQQ9UN88 632 aa13.69□□□□□ -0.22
TSPAN9-206ENST00000537971 WDR19Q8NEZ3 1342 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 SH2B2O14492 632 aaPredicted RBP13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 H0YHG0 523 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 SKILP12757 684 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 KRT25Q7Z3Z0 450 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 MAP3K20Q9NYL2 800 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 SEPT4O43236 478 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 DNM2P50570 870 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 IQSEC1Q6DN90 963 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 C7orf61Q8IZ16 206 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 IWS1Q96ST2 819 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 WDR11Q9BZH6 1224 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 PDCL3Q9H2J4 239 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 CPVLQ9H3G5 476 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 BTBD7Q9P203 1132 aa13.68□□□□□ -0.22
TSPAN9-206ENST00000537971 POLR3GO15318 223 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 SGPL1O95470 568 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 DNERQ8NFT8 737 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 DICER1Q9UPY3 1922 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 MROH7Q68CQ1 1323 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 hCG_1642624A0A1W2PR95 340 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms