RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
CLSTN3-206ENST00000535668 SCN5AQ14524 2016 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 KDM4AO75164 1064 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 SELPP16109 830 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 RABGGTBP53611 331 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 HAND2P61296 217 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 TAP1Q03518 808 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 TRAF1Q13077 416 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 SEC23AQ15436 765 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 DGKDQ16760 1214 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 TRAF7Q6Q0C0 670 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 VSIG10LQ86VR7 867 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 ADAMTS19Q8TE59 1207 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 TAAR1Q96RJ0 339 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 KATNAL1Q9BW62 490 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 KRT23Q9C075 422 aa13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 TRIP12Q14669 1992 aaPredicted RBP13.1□□□□□ -0.31
CLSTN3-206ENST00000535668 ABHD14A-ACY1A0A1B0GW23 586 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 PALM3A6NDB9 673 aaPredicted RBP13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 KIF28PB7ZC32 967 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 LPXNO60711 386 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 RGS20O76081 388 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 CA3P07451 260 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 NR3C2P08235 984 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 PTK7Q13308 1070 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 PTGISQ16647 500 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 TRIM71Q2Q1W2 868 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 FBXO11Q86XK2 927 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 AFG1LQ8WV93 481 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 DHX38Q92620 1227 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 COPS5Q92905 334 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 AMNQ9BXJ7 453 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 LNPKQ9C0E8 428 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 RIOX1Q9H6W3 641 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 KAT14Q9H8E8 782 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 PXMP2Q9NR77 195 aa13.09□□□□□ -0.31
CLSTN3-206ENST00000535668 COL4A6Q14031 1691 aa13.08□□□□□ -0.31
CLSTN3-206ENST00000535668 PARP1P09874 1014 aaKnown RBP13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 MYOGP15173 224 aa13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 IMMTQ16891 758 aaKnown RBP13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 MYSM1Q5VVJ2 828 aa13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 GDF6Q6KF10 455 aaPredicted RBP13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 UHRF1Q96T88 793 aaPredicted RBP13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 PDCD2LQ9BRP1 358 aa13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 UBA5Q9GZZ9 404 aa13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 FRMPD4Q14CM0 1322 aa13.08□□□□□ -0.32
CLSTN3-206ENST00000535668 ZBBXA8MT70 800 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 ZBTB5O15062 677 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 GTPBP6O43824 516 aaPredicted RBP13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 CAND2O75155 1236 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 STAM2O75886 525 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 GJB5O95377 273 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 GOLGA8HP0CJ92 632 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 CKBP12277 381 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 IGFBP4P22692 258 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 LRRC8DQ7L1W4 858 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 CHMP4CQ96CF2 233 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 MAP3K14Q99558 947 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 MTA3Q9BTC8 594 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 MAD2L2Q9UI95 211 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 MTMR7Q9Y216 660 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 EMSYQ7Z589 1322 aa13.07□□□□□ -0.32
CLSTN3-206ENST00000535668 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 TLL1O43897 1013 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 NBNO60934 754 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 SMARCA1P28370 1054 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 ICAM3P32942 547 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 ERVK-21P61565 698 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 USH1GQ495M9 461 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 FAM47CQ5HY64 1035 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 CELF3Q5SZQ8 465 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 CWC27Q6UX04 472 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 RAD9AQ99638 391 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 C16orf70Q9BSU1 422 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 C1QTNF1Q9BXJ1 281 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
CLSTN3-206ENST00000535668 MYH6P13533 1939 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 PTPRSQ13332 1948 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 B4E1Z4 1266 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 KLRF2D3W0D1 207 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 PPP1R11O60927 126 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 ARHGEF15O94989 841 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 IGHDP01880 384 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 PSEN2P49810 448 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 TROAPQ12815 778 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 MBTPS1Q14703 1052 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 COL19A1Q14993 1142 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 ARHGEF16Q5VV41 709 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 FAM43BQ6ZT52 329 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms