RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 ACTN1P12814 892 aa12.02□□□□□ -0.49
CSDE1-217ENST00000534699 ANTXR2P58335 489 aa12.02□□□□□ -0.49
CSDE1-217ENST00000534699 CXCL17Q6UXB2 119 aa12.02□□□□□ -0.49
CSDE1-217ENST00000534699 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
CSDE1-217ENST00000534699 LENG1Q96BZ8 264 aaPredicted RBP12.02□□□□□ -0.49
CSDE1-217ENST00000534699 ARHGAP1Q07960 439 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 NEDD9Q14511 834 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 STAG2Q8N3U4 1231 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 SENP7Q9BQF6 1050 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 HIPK3Q9H422 1215 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 GRIN2DO15399 1336 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 BAIAP3O94812 1187 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 MMP3P08254 477 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 BEX3Q00994 111 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 TMEM240Q5SV17 173 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 DEFB123Q8N688 67 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 RETREG2Q8NC44 543 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 AFAP1L1Q8TED9 768 aa12.01□□□□□ -0.49
CSDE1-217ENST00000534699 HAS3O00219 553 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 OPLAHO14841 1288 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 FGBP02675 491 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 MYL3P08590 195 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 PGM5Q15124 567 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 NLRX1Q86UT6 975 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 MYH7BA7E2Y1 1941 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 CCDC196A0A1B0GTZ2 297 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 CFBP00751 764 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 FOSP01100 380 aaPredicted RBP12□□□□□ -0.49
CSDE1-217ENST00000534699 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 DHX32Q7L7V1 743 aaKnown RBP12□□□□□ -0.49
CSDE1-217ENST00000534699 LRCH3Q96II8 777 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 NEK1Q96PY6 1258 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 PIGSQ96S52 555 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 SLC12A7Q9Y666 1083 aa12□□□□□ -0.49
CSDE1-217ENST00000534699 FIBPO43427 364 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 CELF3Q5SZQ8 465 aaKnown RBP11.99□□□□□ -0.49
CSDE1-217ENST00000534699 GPRASP2Q96D09 838 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 INPP4AQ96PE3 977 aaPredicted RBP11.99□□□□□ -0.49
CSDE1-217ENST00000534699 VAT1LQ9HCJ6 419 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 COL20A1Q9P218 1284 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 MRVI1Q9Y6F6 885 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 B4GALT4O60513 344 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 REC8O95072 547 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 F2P00734 622 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 EXOSC10Q01780 885 aaKnown RBP11.99□□□□□ -0.49
CSDE1-217ENST00000534699 PTK7Q13308 1070 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 NFXL1Q6ZNB6 911 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 EEPD1Q7L9B9 569 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 DHX37Q8IY37 1157 aaKnown RBP11.99□□□□□ -0.49
CSDE1-217ENST00000534699 TNPO1Q92973 898 aaKnown RBP11.99□□□□□ -0.49
CSDE1-217ENST00000534699 SLC9A7Q96T83 725 aa11.99□□□□□ -0.49
CSDE1-217ENST00000534699 CYTH3O43739 400 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 PPP1R11O60927 126 aaPredicted RBP11.98□□□□□ -0.49
CSDE1-217ENST00000534699 NBPF20Q3BBV1 942 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 TMTC3Q6ZXV5 915 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 FANCBQ8NB91 859 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 ANO2Q9NQ90 1003 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 MSRAQ9UJ68 235 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 SPATA31C2B4DYI2 1134 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 ITGB8P26012 769 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 PSMA5P28066 241 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 SEMA6BQ9H3T3 888 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 PCDHA11Q9Y5I1 949 aa11.98□□□□□ -0.49
CSDE1-217ENST00000534699 GNAT1P11488 350 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 PSEN2P49810 448 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 NIPA1Q7RTP0 329 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 SMARCC2Q8TAQ2 1214 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.97□□□□□ -0.49
CSDE1-217ENST00000534699 COL4A6Q14031 1691 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 EMSYQ7Z589 1322 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 HOXC8P31273 242 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 METTL7BQ6UX53 244 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 SEPT14Q6ZU15 432 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 PURBQ96QR8 312 aaKnown RBP11.97□□□□□ -0.49
CSDE1-217ENST00000534699 GTF2IRD1Q9UHL9 959 aa11.97□□□□□ -0.49
CSDE1-217ENST00000534699 ARIH2O95376 493 aa11.96□□□□□ -0.49
CSDE1-217ENST00000534699 EIF2AK2P19525 551 aaKnown RBP11.96□□□□□ -0.49
CSDE1-217ENST00000534699 AP3B2Q13367 1082 aa11.96□□□□□ -0.49
CSDE1-217ENST00000534699 RPAINQ86UA6 219 aa11.96□□□□□ -0.49
CSDE1-217ENST00000534699 CCDC12Q8WUD4 166 aaPredicted RBP11.96□□□□□ -0.49
CSDE1-217ENST00000534699 AFG1LQ8WV93 481 aa11.96□□□□□ -0.49
CSDE1-217ENST00000534699 TBC1D5Q92609 795 aa11.96□□□□□ -0.49
CSDE1-217ENST00000534699 ESYT2A0FGR8 921 aa11.96□□□□□ -0.5
CSDE1-217ENST00000534699 SLC35G1Q2M3R5 365 aa11.96□□□□□ -0.5
CSDE1-217ENST00000534699 USP26Q9BXU7 913 aa11.96□□□□□ -0.5
CSDE1-217ENST00000534699 CPVLQ9H3G5 476 aa11.96□□□□□ -0.5
CSDE1-217ENST00000534699 CXCL10P02778 98 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 MFSD10Q14728 455 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 CCDC136Q96JN2 1154 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 AGXT2Q9BYV1 514 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 NEFLP07196 543 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 IQCF3P0C7M6 154 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 CSF2RAP15509 400 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 SELPP16109 830 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 HSPA4P34932 840 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 EPHB4P54760 987 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 APOA5Q6Q788 366 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms