RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	USP38	Q8NB14	1042 aa		28.2	■■■□□ 2.1
RELA-223	ENST00000534283	PDCD2L	Q9BRP1	358 aa		28.2	■■■□□ 2.1
RELA-223	ENST00000534283	IQCF3	P0C7M6	154 aa		28.19	■■■□□ 2.1
RELA-223	ENST00000534283	ANTXR2	P58335	489 aa		28.19	■■■□□ 2.1
RELA-223	ENST00000534283	VSIG10L	Q86VR7	867 aa		28.19	■■■□□ 2.1
RELA-223	ENST00000534283	IGDCC4	Q8TDY8	1250 aa		28.19	■■■□□ 2.1
RELA-223	ENST00000534283	PIGS	Q96S52	555 aa		28.19	■■■□□ 2.1
RELA-223	ENST00000534283	NKX2-4	Q9H2Z4	354 aa		28.19	■■■□□ 2.1
RELA-223	ENST00000534283	SLC4A7	Q9Y6M7	1214 aa		28.19	■■■□□ 2.1
RELA-223	ENST00000534283	SCN10A	Q9Y5Y9	1956 aa		28.19	■■■□□ 2.1
RELA-223	ENST00000534283	CHD9	Q3L8U1	2897 aa		28.18	■■■□□ 2.1
RELA-223	ENST00000534283	RFC2	P35250	354 aa		28.18	■■■□□ 2.1
RELA-223	ENST00000534283	CHST3	Q7LGC8	479 aa		28.18	■■■□□ 2.1
RELA-223	ENST00000534283	NCOA7	Q8NI08	942 aa		28.18	■■■□□ 2.1
RELA-223	ENST00000534283	PRDM12	Q9H4Q4	367 aa		28.18	■■■□□ 2.1
RELA-223	ENST00000534283	PRUNE2	Q8WUY3	3088 aa		28.17	■■■□□ 2.1
RELA-223	ENST00000534283	CAST	P20810	708 aa	Known RBP	28.17	■■■□□ 2.1
RELA-223	ENST00000534283	HOXA13	P31271	388 aa	Predicted RBP	28.17	■■■□□ 2.1
RELA-223	ENST00000534283	RABGGTB	P53611	331 aa		28.17	■■■□□ 2.1
RELA-223	ENST00000534283	ADGRE1	Q14246	886 aa		28.17	■■■□□ 2.1
RELA-223	ENST00000534283	DEFB128	Q7Z7B8	93 aa		28.17	■■■□□ 2.1
RELA-223	ENST00000534283	MB21D2	Q8IYB1	491 aa	Predicted RBP	28.17	■■■□□ 2.1
RELA-223	ENST00000534283	HOXD8	P13378	290 aa	Predicted RBP	28.16	■■■□□ 2.1
RELA-223	ENST00000534283	LAMC2	Q13753	1193 aa		28.16	■■■□□ 2.1
RELA-223	ENST00000534283	WTAP	Q15007	396 aa		28.16	■■■□□ 2.1
RELA-223	ENST00000534283	PTGIS	Q16647	500 aa		28.16	■■■□□ 2.1
RELA-223	ENST00000534283	GDF6	Q6KF10	455 aa	Predicted RBP	28.16	■■■□□ 2.1
RELA-223	ENST00000534283	HOMER1	Q86YM7	354 aa		28.16	■■■□□ 2.1
RELA-223	ENST00000534283	RETREG2	Q8NC44	543 aa		28.16	■■■□□ 2.1
RELA-223	ENST00000534283	IL31RA	Q8NI17	732 aa		28.16	■■■□□ 2.1
RELA-223	ENST00000534283	MRVI1	Q9Y6F6	885 aa		28.16	■■■□□ 2.1
RELA-223	ENST00000534283	PNMA6F	A0A0J9YX94	578 aa		28.15	■■■□□ 2.1
RELA-223	ENST00000534283	MYOG	P15173	224 aa		28.15	■■■□□ 2.1
RELA-223	ENST00000534283	GPNMB	Q14956	572 aa		28.15	■■■□□ 2.1
RELA-223	ENST00000534283	DGKD	Q16760	1214 aa		28.15	■■■□□ 2.1
RELA-223	ENST00000534283	RALYL	Q86SE5	291 aa	Known RBP	28.15	■■■□□ 2.1
RELA-223	ENST00000534283	PPTC7	Q8NI37	304 aa		28.15	■■■□□ 2.1
RELA-223	ENST00000534283	PCDHA11	Q9Y5I1	949 aa		28.15	■■■□□ 2.1
RELA-223	ENST00000534283	VCAN	P13611	3396 aa		28.15	■■■□□ 2.1
RELA-223	ENST00000534283	ERICH2	A1L162	156 aa		28.14	■■■□□ 2.1
RELA-223	ENST00000534283	HAS3	O00219	553 aa		28.14	■■■□□ 2.1
RELA-223	ENST00000534283	ATP2A2	P16615	1042 aa	Known RBP	28.14	■■■□□ 2.1
RELA-223	ENST00000534283	CHMP4BP1	P59074	171 aa		28.14	■■■□□ 2.1
RELA-223	ENST00000534283	BFSP2	Q13515	415 aa		28.14	■■■□□ 2.1
RELA-223	ENST00000534283	PGM5	Q15124	567 aa		28.14	■■■□□ 2.1
RELA-223	ENST00000534283	TMEM67	Q5HYA8	995 aa		28.14	■■■□□ 2.1
RELA-223	ENST00000534283	DHX38	Q92620	1227 aa	Known RBP	28.14	■■■□□ 2.1
RELA-223	ENST00000534283	SLC28A3	Q9HAS3	691 aa		28.14	■■■□□ 2.1
RELA-223	ENST00000534283	RBM8A	Q9Y5S9	174 aa	Known RBP	28.14	■■■□□ 2.1
RELA-223	ENST00000534283	ZBBX	A8MT70	800 aa		28.13	■■■□□ 2.09
RELA-223	ENST00000534283	GCOM1	H8Y6P7	765 aa	Predicted RBP	28.13	■■■□□ 2.09
RELA-223	ENST00000534283	POLR2M	P0CAP2	368 aa		28.13	■■■□□ 2.09
RELA-223	ENST00000534283	MYCL	P12524	364 aa	Predicted RBP	28.13	■■■□□ 2.09
RELA-223	ENST00000534283	SP2	Q02086	613 aa		28.13	■■■□□ 2.09
RELA-223	ENST00000534283	TRAF1	Q13077	416 aa		28.13	■■■□□ 2.09
RELA-223	ENST00000534283	SART3	Q15020	963 aa	Known RBP	28.13	■■■□□ 2.09
RELA-223	ENST00000534283	MYSM1	Q5VVJ2	828 aa		28.13	■■■□□ 2.09
RELA-223	ENST00000534283	DHX37	Q8IY37	1157 aa	Known RBP	28.13	■■■□□ 2.09
RELA-223	ENST00000534283	F2	P00734	622 aa		28.12	■■■□□ 2.09
RELA-223	ENST00000534283	PSEN2	P49810	448 aa		28.12	■■■□□ 2.09
RELA-223	ENST00000534283	RBL2	Q08999	1139 aa		28.12	■■■□□ 2.09
RELA-223	ENST00000534283	CELF3	Q5SZQ8	465 aa	Known RBP	28.12	■■■□□ 2.09
RELA-223	ENST00000534283	CATIP	Q7Z7H3	387 aa		28.12	■■■□□ 2.09
RELA-223	ENST00000534283	GAS2L1	Q99501	681 aa	Predicted RBP	28.12	■■■□□ 2.09
RELA-223	ENST00000534283	MAP3K14	Q99558	947 aa		28.12	■■■□□ 2.09
RELA-223	ENST00000534283	HDAC6	Q9UBN7	1215 aa		28.12	■■■□□ 2.09
RELA-223	ENST00000534283	GTF2IRD1	Q9UHL9	959 aa		28.12	■■■□□ 2.09
RELA-223	ENST00000534283	NOD1	Q9Y239	953 aa		28.12	■■■□□ 2.09
RELA-223	ENST00000534283	COL9A3	Q14050	684 aa	Predicted RBP	28.11	■■■□□ 2.09
RELA-223	ENST00000534283	KCNV1	Q6PIU1	500 aa		28.11	■■■□□ 2.09
RELA-223	ENST00000534283	CAGE1	Q8TC20	777 aa		28.11	■■■□□ 2.09
RELA-223	ENST00000534283	LSG1	Q9H089	658 aa	Known RBP	28.11	■■■□□ 2.09
RELA-223	ENST00000534283	LY9	Q9HBG7	655 aa		28.11	■■■□□ 2.09
RELA-223	ENST00000534283	PPFIA4	O75335	1185 aa		28.1	■■■□□ 2.09
RELA-223	ENST00000534283	TGFB3	P10600	412 aa		28.1	■■■□□ 2.09
RELA-223	ENST00000534283	ACTN1	P12814	892 aa		28.1	■■■□□ 2.09
RELA-223	ENST00000534283	HSDL1	Q3SXM5	330 aa		28.1	■■■□□ 2.09
RELA-223	ENST00000534283	FCHSD1	Q86WN1	690 aa		28.1	■■■□□ 2.09
RELA-223	ENST00000534283	PHOSPHO2	Q8TCD6	241 aa		28.1	■■■□□ 2.09
RELA-223	ENST00000534283	AFAP1L1	Q8TED9	768 aa		28.1	■■■□□ 2.09
RELA-223	ENST00000534283	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	28.1	■■■□□ 2.09
RELA-223	ENST00000534283	ZFP91	Q96JP5	570 aa	Predicted RBP	28.1	■■■□□ 2.09
RELA-223	ENST00000534283	ZNF286B	P0CG31	522 aa		28.09	■■■□□ 2.09
RELA-223	ENST00000534283	CCND2	P30279	289 aa		28.09	■■■□□ 2.09
RELA-223	ENST00000534283	MFSD10	Q14728	455 aa		28.09	■■■□□ 2.09
RELA-223	ENST00000534283	MTA3	Q9BTC8	594 aa		28.09	■■■□□ 2.09
RELA-223	ENST00000534283	PRDM6	Q9NQX0	595 aa		28.09	■■■□□ 2.09
RELA-223	ENST00000534283	FRMPD4	Q14CM0	1322 aa		28.09	■■■□□ 2.09
RELA-223	ENST00000534283	SPTBN5	Q9NRC6	3674 aa	Known RBP	28.08	■■■□□ 2.09
RELA-223	ENST00000534283	SELP	P16109	830 aa		28.08	■■■□□ 2.09
RELA-223	ENST00000534283	UBA1	P22314	1058 aa	Known RBP	28.08	■■■□□ 2.09
RELA-223	ENST00000534283	HIC1	Q14526	733 aa		28.08	■■■□□ 2.09
RELA-223	ENST00000534283	KIAA0753	Q2KHM9	967 aa		28.08	■■■□□ 2.09
RELA-223	ENST00000534283	CCDC155	Q8N6L0	562 aa		28.08	■■■□□ 2.09
RELA-223	ENST00000534283	C7orf31	Q8N865	590 aa		28.08	■■■□□ 2.09
RELA-223	ENST00000534283	KATNAL1	Q9BW62	490 aa		28.08	■■■□□ 2.09
RELA-223	ENST00000534283	FTO	Q9C0B1	505 aa	Known RBP eCLIP	28.08	■■■□□ 2.09
RELA-223	ENST00000534283	BCAS3	Q9H6U6	928 aa		28.08	■■■□□ 2.09
RELA-223	ENST00000534283	GGPS1	O95749	300 aa		28.07	■■■□□ 2.08
RELA-223	ENST00000534283	SMARCA1	P28370	1054 aa		28.07	■■■□□ 2.08

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