RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 GANQ9H2C0 597 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 BRMS1Q9HCU9 246 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 DUSP10Q9Y6W6 482 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 DICER1Q9UPY3 1922 aaKnown RBP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 ZNF536O15090 1300 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 B4DLN1 442 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 CIITAP33076 1130 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 AARSP49588 968 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNPC3-209ENST00000533834 ITIH3Q06033 890 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 BMT2Q1RMZ1 405 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 RETREG2Q8NC44 543 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 SIX2Q9NPC8 291 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 FRMPD4Q14CM0 1322 aa8.01□□□□□ -1.13
RNPC3-209ENST00000533834 AGPSO00116 658 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 ATP1A1P05023 1023 aaKnown RBP8□□□□□ -1.13
RNPC3-209ENST00000533834 ATP2B1P20020 1258 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 SPAG1Q07617 926 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 HEATR3Q7Z4Q2 680 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 COA7Q96BR5 231 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 GMLQ99445 158 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 UBA5Q9GZZ9 404 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 BCAS3Q9H6U6 928 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 SYNPO2Q9UMS6 1093 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 CCDC151A5D8V7 595 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 PIK3CDO00329 1044 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 CCNT1O60563 726 aaKnown RBP8□□□□□ -1.13
RNPC3-209ENST00000533834 TUBB2AQ13885 445 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 KRT222Q8N1A0 295 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 GJA10Q969M2 543 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 CNOT6LQ96LI5 555 aaKnown RBP8□□□□□ -1.13
RNPC3-209ENST00000533834 TUBGCP2Q9BSJ2 902 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 TUBB2BQ9BVA1 445 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 GPR88Q9GZN0 384 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 ANKIB1Q9P2G1 1089 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 MAPK8IP1Q9UQF2 711 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 ANK1P16157 1881 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 FRMPD2Q68DX3 1309 aaPredicted RBP8□□□□□ -1.13
RNPC3-209ENST00000533834 YDJCA8MPS7 323 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 PLCG2P16885 1265 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 TECP42680 631 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 DNM2P50570 870 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 TRIM59Q8IWR1 403 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 EXOC1Q9NV70 894 aa8□□□□□ -1.13
RNPC3-209ENST00000533834 AJAP1Q9UKB5 411 aaPredicted RBP8□□□□□ -1.13
RNPC3-209ENST00000533834 EPN1Q9Y6I3 576 aaPredicted RBP8□□□□□ -1.13
RNPC3-209ENST00000533834 TTLL1O95922 423 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 SYF2O95926 243 aaKnown RBP7.99□□□□□ -1.13
RNPC3-209ENST00000533834 LDHCP07864 332 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 CYP3A4P08684 503 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 MYBL2P10244 700 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 PRLRP16471 622 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 CASQ1P31415 396 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 CASP5P51878 434 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 JAM2P57087 298 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 GNG11P61952 73 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 VSNL1P62760 191 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 ZBED6P86452 979 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 HDLBPQ00341 1268 aaKnown RBP7.99□□□□□ -1.13
RNPC3-209ENST00000533834 KLHL10Q6JEL2 608 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 SCFD1Q8WVM8 642 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 GMCL1Q96IK5 515 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 NYAP2Q9P242 653 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 BIN2Q9UBW5 565 aaPredicted RBP7.99□□□□□ -1.13
RNPC3-209ENST00000533834 TMEM59LQ9UK28 342 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 A0A1W2PRG0 241 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 LRRIQ3A6PVS8 624 aaPredicted RBP7.99□□□□□ -1.13
RNPC3-209ENST00000533834 USP17L10C9JJH3 530 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 ZBTB5O15062 677 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 MED24O75448 989 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 PIP4K2BP78356 416 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 MCM6Q14566 821 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 NFIL3Q16649 462 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 KIF4BQ2VIQ3 1234 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 CCDC170Q8IYT3 715 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 MMS19Q96T76 1030 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 CAPN6Q9Y6Q1 641 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 KIF20AO95235 890 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 AKAP17AQ02040 695 aaKnown RBP7.99□□□□□ -1.13
RNPC3-209ENST00000533834 VWA3BQ502W6 1294 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 REXO1Q8N1G1 1221 aaKnown RBP7.99□□□□□ -1.13
RNPC3-209ENST00000533834 OR8K1Q8NGG5 319 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 RRP36Q96EU6 259 aaKnown RBP7.99□□□□□ -1.13
RNPC3-209ENST00000533834 SH2D4AQ9H788 454 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 NHEJ1Q9H9Q4 299 aaPredicted RBP7.99□□□□□ -1.13
RNPC3-209ENST00000533834 SUGCTQ9HAC7 445 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 HDAC6Q9UBN7 1215 aa7.99□□□□□ -1.13
RNPC3-209ENST00000533834 BTNL10A8MVZ5 291 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 FAM86B1E9PN63 330 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 TULP2O00295 520 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 FAM86B2P0C5J1 330 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 CYP11B2P19099 503 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 TNFRSF8P28908 595 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 HSPA1LP34931 641 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 KRT9P35527 623 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 UBE2SQ16763 222 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 WHAMMP3Q1A5X7 153 aa7.98□□□□□ -1.13
RNPC3-209ENST00000533834 DPP8Q6V1X1 898 aaPredicted RBP7.98□□□□□ -1.13
RNPC3-209ENST00000533834 LRRC47Q8N1G4 583 aaKnown RBP7.98□□□□□ -1.13
RNPC3-209ENST00000533834 SYN2Q92777 582 aaPredicted RBP7.98□□□□□ -1.13
RNPC3-209ENST00000533834 LZTFL1Q9NQ48 299 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms