RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 IQCA1Q86XH1 822 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 PHOSPHO2Q8TCD6 241 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 SCFD2Q8WU76 684 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 MAP4K1Q92918 833 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 UBAC1Q9BSL1 405 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 LSG1Q9H089 658 aaKnown RBP10.16□□□□□ -0.78
COPB1-210ENST00000533533 TCP11L1Q9NUJ3 509 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 LAMA4Q16363 1823 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 WDR19Q8NEZ3 1342 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 RFXAPO00287 272 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 GTPBP6O43824 516 aaPredicted RBP10.15□□□□□ -0.78
COPB1-210ENST00000533533 IQCF3P0C7M6 154 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 PDHBP11177 359 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 EDNRBP24530 442 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 RPS6P62753 249 aaKnown RBP10.15□□□□□ -0.78
COPB1-210ENST00000533533 PTPN11Q06124 597 aaPredicted RBP10.15□□□□□ -0.78
COPB1-210ENST00000533533 SKIV2LQ15477 1246 aaKnown RBP10.15□□□□□ -0.78
COPB1-210ENST00000533533 RETREG2Q8NC44 543 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 DNERQ8NFT8 737 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 PPP1R13LQ8WUF5 828 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 COPS5Q92905 334 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 NECAB3Q96P71 396 aaPredicted RBP10.15□□□□□ -0.78
COPB1-210ENST00000533533 SLC9A7Q96T83 725 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 MPHOSPH6Q99547 160 aaKnown RBP10.15□□□□□ -0.78
COPB1-210ENST00000533533 CERS4Q9HA82 394 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 RAPGEFL1Q9UHV5 662 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 MTCH2Q9Y6C9 303 aa10.15□□□□□ -0.78
COPB1-210ENST00000533533 EPOPA6NHQ4 379 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 B4DLN1 442 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 E7EWF7 191 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 SNHG28P0DPA3 235 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 TXNP10599 105 aaKnown RBP10.14□□□□□ -0.79
COPB1-210ENST00000533533 KCNQ1P51787 676 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 MRPL12P52815 198 aaKnown RBP10.14□□□□□ -0.79
COPB1-210ENST00000533533 ZNF543Q08ER8 600 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 BFSP2Q13515 415 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 CCDC178Q5BJE1 867 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 RNF20Q5VTR2 975 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 CREB3L3Q68CJ9 461 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 HERC6Q8IVU3 1022 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 NCOA7Q8NI08 942 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 TTC14Q96N46 770 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 ZSCAN10Q96SZ4 725 aaPredicted RBP10.14□□□□□ -0.79
COPB1-210ENST00000533533 FTOQ9C0B1 505 aaKnown RBP eCLIP10.14□□□□□ -0.793e-14■□□□□ 8.6
COPB1-210ENST00000533533 KAT14Q9H8E8 782 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 ZSWIM5Q9P217 1185 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 NOD1Q9Y239 953 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 TAF6LQ9Y6J9 622 aa10.14□□□□□ -0.79
COPB1-210ENST00000533533 BAZ2BQ9UIF8 2168 aaKnown RBP10.14□□□□□ -0.79
COPB1-210ENST00000533533 ERICH2A1L162 156 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 C19orf67A6NJJ6 358 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 KIF28PB7ZC32 967 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 SLC27A2O14975 620 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 BAIAP3O94812 1187 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 ARHGEF15O94989 841 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 ARIH2O95376 493 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 TAP1Q03518 808 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 KRT40Q6A162 431 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 CYB5R4Q7L1T6 521 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 CHST3Q7LGC8 479 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 RGS22Q8NE09 1264 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 ARNTL2Q8WYA1 636 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 C1QTNF1Q9BXJ1 281 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 COG5Q9UP83 839 aa10.13□□□□□ -0.79
COPB1-210ENST00000533533 IFIT3O14879 490 aaKnown RBP10.12□□□□□ -0.79
COPB1-210ENST00000533533 REC8O95072 547 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 NT5C2P49902 561 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 CHMP4BP1P59074 171 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 SART3Q15020 963 aaKnown RBP10.12□□□□□ -0.79
COPB1-210ENST00000533533 PTGISQ16647 500 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 USH1GQ495M9 461 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 GPATCH4Q5T3I0 446 aaKnown RBP10.12□□□□□ -0.79
COPB1-210ENST00000533533 IFIT1BQ5T764 474 aaKnown RBP10.12□□□□□ -0.79
COPB1-210ENST00000533533 CCDC62Q6P9F0 684 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 STOX1Q6ZVD7 989 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 CAGE1Q8TC20 777 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 AFG1LQ8WV93 481 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 CTAGE1Q96RT6 745 aa10.12□□□□□ -0.79
COPB1-210ENST00000533533 MICAL3Q7RTP6 2002 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 TLL1O43897 1013 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 LPXNO60711 386 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 MMP3P08254 477 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 GOLGA8HP0CJ92 632 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 KCNJ6P48051 423 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 ARHGAP1Q07960 439 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 GRB10Q13322 594 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 GPNMBQ14956 572 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 WTAPQ15007 396 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 NECTIN1Q15223 517 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 GDF6Q6KF10 455 aaPredicted RBP10.11□□□□□ -0.79
COPB1-210ENST00000533533 SEPT14Q6ZU15 432 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 SESTD1Q86VW0 696 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 DGKHQ86XP1 1220 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 ENAHQ8N8S7 591 aaPredicted RBP10.11□□□□□ -0.79
COPB1-210ENST00000533533 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 AFAP1L1Q8TED9 768 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 KAT2BQ92831 832 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 HLA-CQ95604 372 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 UBA5Q9GZZ9 404 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms